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View Structure Prediction Details

Protein: CG8079-PA
Organism: Drosophila melanogaster
Length: 601 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8079-PA.

Description E-value Query
Range
Subject
Range
CG8079-PB - This gene is referred to in FlyBase by the symbol Dmel\CG8079 (CG8079, FBgn0034002). It is a protein...
352.0 [0..1] [601..1]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPAEEEDL ADTVAKYDSI ELKSIQDLET CEQQQLLQYV EKLHGIIRKY DTKLASYKQK  60
   61 LLHYVSREEK VSCDKASQAT ESELQECQYS MENDEDTNKK DQPNDLSATD AFSFVDEMRQ 120
  121 AAKHAENLNN FVYEHTSGMY YDPKTGYYYN AEYGLYYDGN NGCYYSYDHA KDSYEFHSQA 180
  181 QVQANDAAKP ESED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [195-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDLEVQFDEL GGVITDHETL KKIKAEKQKA KDQAEKSKRK AKKKKSKKHS KKRSKKERRH  60
   61 KSKKRHRHSD DERSNDAEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [274-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GELSQSSDSS SDSSNEDSSS NTEDSSVPVF KAAGRFQDIA KKYPPSLRII VQETNVESLK  60
   61 VGSLHLITYK GGSLGREGAH DVIIPDVNVS KCHLKFKYEN KLGIYQCLDL GSRNGTILNG 120
  121 SPMSSDAMDL VHGSVITLGQ TRLLCHVHEG NSTCGLCEP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.154902
Match: 2jpeA
Description: No description for 2jpeA was found.

Predicted Domain #4
Region A:
Residues: [433-601]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLLIENSPPV VAAVASSTAS VLSHKEQLKK LQRKYGLENE KFVDTSGNGQ SNYNDRAATR  60
   61 RVQVGSSTDK EKTEVACVNT EIGSSNKGFK MLSKLGWQKG EKLGKTNASA GLLEPINVVA 120
  121 NEGTSGLGNS DPVLSSSRTI DKRKLANLKI TQARYQRASD MFGQSDDSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle