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View Structure Prediction Details

Protein: CG8079-PA
Organism: Drosophila melanogaster
Length: 601 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8079-PA.

Description E-value Query
Range
Subject
Range
CG8079-PB - This gene is referred to in FlyBase by the symbol Dmel\CG8079 (CG8079, FBgn0034002). It is a protein...
352.0 [0..1] [601..1]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPAEEEDL ADTVAKYDSI ELKSIQDLET CEQQQLLQYV EKLHGIIRKY DTKLASYKQK  60
   61 LLHYVSREEK VSCDKASQAT ESELQECQYS MENDEDTNKK DQPNDLSATD AFSFVDEMRQ 120
  121 AAKHAENLNN FVYEHTSGMY YDPKTGYYYN AEYGLYYDGN NGCYYSYDHA KDSYEFHSQA 180
  181 QVQANDAAKP ESED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [195-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDLEVQFDEL GGVITDHETL KKIKAEKQKA KDQAEKSKRK AKKKKSKKHS KKRSKKERRH  60
   61 KSKKRHRHSD DERSNDAEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [274-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GELSQSSDSS SDSSNEDSSS NTEDSSVPVF KAAGRFQDIA KKYPPSLRII VQETNVESLK  60
   61 VGSLHLITYK GGSLGREGAH DVIIPDVNVS KCHLKFKYEN KLGIYQCLDL GSRNGTILNG 120
  121 SPMSSDAMDL VHGSVITLGQ TRLLCHVHEG NSTCGLCEP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.154902
Match: 2jpeA
Description: No description for 2jpeA was found.

Predicted Domain #4
Region A:
Residues: [433-601]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLLIENSPPV VAAVASSTAS VLSHKEQLKK LQRKYGLENE KFVDTSGNGQ SNYNDRAATR  60
   61 RVQVGSSTDK EKTEVACVNT EIGSSNKGFK MLSKLGWQKG EKLGKTNASA GLLEPINVVA 120
  121 NEGTSGLGNS DPVLSSSRTI DKRKLANLKI TQARYQRASD MFGQSDDSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle