| Protein: | Dh44-R1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 504 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dh44-R1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
287.0 | [0..103] | [492..1] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MSDHNHIDSV NASGSDPLLD LHNLDGIGES VELQCLVQEH IEASTYGNDS GHCLTQFDSI 60
61 LCWPRTARGT LAVLQCMDEL QGIHYDSSKN ATRFCHANGT WEKYT
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 2jodA |
| Description: | No description for 2jodA was found. |
| Term | Confidence | Notes |
| G-protein coupled receptor activity | 7.11838006478957 | bayes_pls_golite062009 |
| transmembrane receptor activity | 5.41031049482732 | bayes_pls_golite062009 |
| receptor activity | 5.12318570081263 | bayes_pls_golite062009 |
| signal transducer activity | 4.16951678107564 | bayes_pls_golite062009 |
| molecular transducer activity | 4.16951678107564 | bayes_pls_golite062009 |
| pituitary adenylate cyclase-activating polypeptide receptor activity | 2.36627671354861 | bayes_pls_golite062009 |
| binding | 1.48001943103409 | bayes_pls_golite062009 |
| peptide binding | 1.37672683415634 | bayes_pls_golite062009 |
| secretin receptor activity | 1.22301183149097 | bayes_pls_golite062009 |
| growth hormone-releasing hormone receptor activity | 0.621179725102141 | bayes_pls_golite062009 |
|
Region A: Residues: [106-414] |
1 11 21 31 41 51
| | | | | |
1 NYDACAHLPA PESVPEFEVI VELPTIIYYI GYTLSLVSLS LALIVFAYFK ELRCLRNTIH 60
61 ANLFFTYIMS ALFWILLLSV QISIRSGVGS CIALITLFHF FTLTNFFWML VEGLYLYMLV 120
121 VKTFSGDNLR FNIYASIGWG GPALFVVTWA VAKSLTVTYS TPEKYEINCP WMQETHVDWI 180
181 YQGPVCAVLI INLTFLLRIM WVLITKLRSA NTVETRQYRK AAKALLVLIP LFGITYLVVL 240
241 AGPSESGLMG HMFAVLRAVL LSTQGFSVSL FYCFLNSEVR NALRHHISTW RDTRTIQLNQ 300
301 NRRYTTKSF
|
| Detection Method: | |
| Confidence: | 35.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [415-504] |
1 11 21 31 41 51
| | | | | |
1 SKGGGSPRAE SMRPLTSYYG RGKRESCVSS ATTTTLVGQH APLSLHRGSN NALHTMPTLA 60
61 ANAMSSGSTL SVMPRAISPL MRQGLEENSV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
