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View Structure Prediction Details

Protein: FBpp0292102
Organism: Drosophila melanogaster
Length: 737 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0292102.

Description E-value Query
Range
Subject
Range
gi|220951616 - gi|220951616|gb|ACL88351.1| nemy-PD [synthetic construct]
FBpp0292098 - type=protein; loc=2R:complement(8558681..8558854,8559062..8560092,8560169..8560542,8560605..8560844,...
564.0 [0..42] [737..12]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDRSWNLLQ YATEKAPIPL DGYTAEEAAE FKDSIRQKIV DDLKSMTGEE LIELVKQNAA  60
   61 KVEEEKVEIP PTEPLSGTEE GKERVQDDAD LIDAGIIAEM VAGLCTKSQK ETFIKVITKY 120
  121 ISSQRRHYSM RPHREQEQRN AEDVLFDMFA SEETGLISMG KFLAGLKTTG IRRND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [176-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRVRELMDNL KKVHKLNNYE TGSSAETQHL NRETFKAVVA PNIVLIAKAF RQQFVIPDFT  60
   61 SFVKDIEDIY NRCKTNTLGK LADYIPQLAR YNPDSWGLSI CTIDGQRFSI GDVDVPFTLQ 120
  121 SCSKPLTYAI ALEKLGPKVV HSYVGQEPS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 2dfwA
Description: No description for 2dfwA was found.

Predicted Domain #3
Region A:
Residues: [325-737]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRNFNELVLD QNKKPHNPMI NAGAILTCSL MNALVKPDMT SAEIFDYTMS WFKRLSGGEY  60
   61 IGFNNAVFLS EREAADRNYA LGFYMRENKC FPKRTNLKEV MDFYFQCCSM ETNCEAMSVI 120
  121 AASLANGGIC PTTEEKVFRP EVIRDVLSIM HSCGTYDYSG QFAFKVGLPA KSGVSGGMML 180
  181 VIPNVMGIFA WSPPLDHLGN TVRGLQFCEE LVSMFNFHRY DNLKHLSNKK DPRKHRYETK 240
  241 GLSIVNLLFS AASGDVTALR RHRLSGMDIT LADYDGRTAL HLAASEGHLE CVKFLLEQCH 300
  301 VPHNPKDRWG NLPVDEAENF GHCHVVEFLR SWAEKADQSS EECKPEAVTS KTQADEEICS 360
  361 TSDLETSPTT SPIPTPVESG SRAGSGRSSP VPSDAGSTAS AGSSIDDKTK PGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.09691
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle