| Protein: | RpIII128-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1137 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RpIII128-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1190.0 | [0..1] | [1134..20] |
|
Region A: Residues: [1-1137] |
1 11 21 31 41 51
| | | | | |
1 MVELKMGDHN VEATTWDPGD SKDWSVPIKP LTEKWKLVPA FLQVKGLVKQ HIDSFNHFIN 60
61 VDIKKIVKAN ELVTSGADPL FYLKYLDVRV GKPDIDDGFN ITKATTPHEC RLRDTTYSAP 120
121 ITVDIEYTRG TQRIKRNNLL IGRMPLMLRC SNCALTGKSE FELSKLNECP LDPGGYFVVR 180
181 GQEKVILIQE QLSWNKMLTE DFNGVVQCQV TSSTHEKKSR TLVLSKHGKY YLKHNSMTDD 240
241 IPIVVIFKAL GVVSDQEIQS LIGIDSKSQN RFGASLIDAY NLKVFTQQRA LEYMGSKLVV 300
301 KRFQSATTKT PSEEARELLL TTILAHVPVD NFNLQMKAIY VSMMVRRVMA AELDKTLFDD 360
361 RDYYGNKRLE LAGSLLSMMF EDLFKRMNWE LKTIADKNIP KVKAAQFDVV KHMRAAQITA 420
421 GLESAISSGN WTIKRFKMER AGVTQVLSRL SYISALGMMT RVNSQFEKTR KVSGPRSLQP 480
481 SQWGMLCPSD TPEGEACGLV KNLALMTHIT TEVEERPVMI VAFNAGVEDI REVSGNPINN 540
541 PNVFLVFING NVLGLTLNHK HLVRNLRYMR RKGRMGSYVS VHTSYTQRCI YIHTDGGRLC 600
601 RPYVIVENRR PLVKQHHLDE LNRGIRKFDD FLLDGLIEYL DVNEENDSFI AWNEDQIEDR 660
661 TTHLEIEPFT LLGVCAGLVP YPHHNQSPRN TYQCAMGKQA MGMIGYNQKN RIDSLMYNLV 720
721 YPHAPMVKSK TIELTNFDKL PAGQNATVAV MSYSGYDIED ALILNKASID RGYGRCLVYK 780
781 NSKCTVKRYA NQTFDRIMGP MKDALTNKVI FKHDVLDTDG IVAPGEQVQN KQIMINKEMP 840
841 AVTSMNPLQG QSAQVPYTAV PISYKGPEPS YIERVMVSAN AEEDFLIKIL LRQTRIPEIG 900
901 DKFSSRHGQK GVTGLIVEQE DMPFNDFGIC PDMIMNPHGF PSRMTVGKTL ELLGGKAGLL 960
961 EGKFHYGTAF GGSKVEDIQA ELERHGFNYV GKDFFYSGIT GTPLEAYIYS GPVYYQKLKH1020
1021 MVQDKMHARA RGPKAVLTRQ PTQGRSREGG LRLGEMERDC LISYGASMLI MERLMISSDA1080
1081 FEVDVCRTCG RMAYCSWCHF CQSSANVSKI SMPYACKLLF QELTSMNVVP KMILENY
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1i3qB |
| Description: | RBP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-directed RNA polymerase activity | 10.2021663255698 | bayes_pls_golite062009 |
| RNA polymerase activity | 10.2021663255698 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 7.6240729546188 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 6.31198922553685 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 5.44374972993429 | bayes_pls_golite062009 |
| transferase activity | 4.83218811360621 | bayes_pls_golite062009 |
| transcription regulator activity | 2.34884279395902 | bayes_pls_golite062009 |
| nucleic acid binding | 2.33174616086951 | bayes_pls_golite062009 |
| DNA binding | 2.27079409864244 | bayes_pls_golite062009 |
| binding | 1.73416306650822 | bayes_pls_golite062009 |
| RNA polymerase II transcription mediator activity | 1.53259746846673 | bayes_pls_golite062009 |
| catalytic activity | 1.36406839864424 | bayes_pls_golite062009 |
| RNA binding | 1.12618950637766 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.847783043631028 | bayes_pls_golite062009 |
| protein binding | 0.45174975126993 | bayes_pls_golite062009 |
