| Protein: | Syx6-PD |
| Organism: | Drosophila melanogaster |
| Length: | 323 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Syx6-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
183.0 | [0..12] | [323..28] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MSLEDPFFVV KDEVFKALNK TRGLYLRWRE LGENGGTEAE WTTTELRNSL RSIEWDLEDL 60
61 EDTISIVEKN PSKFRIDNRE LS
|
| Detection Method: |  |
| Confidence: | 16.522879 |
| Match: | 1lvfA |
| Description: | Syntaxin 6, SNAP-25 homolog |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| phosphatidic acid binding | 2.19104724611902 | bayes_pls_golite062009 |
| binding | 2.13344290488739 | bayes_pls_golite062009 |
| SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| protein binding | 1.51700626946713 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.2360389745429 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| protein transporter activity | 0.81087535212264 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.398018181744571 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 0.27873535382283 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 0.27873535382283 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.0981818568206971 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
|
Region A: Residues: [83-232] |
1 11 21 31 41 51
| | | | | |
1 SRRHFIDNTR DEVKQMKDKM SLNRSRDRDI TAHQPLLDND RHSPNHNHSI AIPNSNSNSN 60
61 EYHQHPHNDR TYLVECPNGN SLINSGSQVA NTIAGTMSAA AAAASRHSGT KYSKLENALD 120
121 SPSHYGQTHH GGMDSPSHRY VGETVSIQQR
|
| Detection Method: | |
| Confidence: | 2.79 |
| Match: | 2npsD |
| Description: | No description for 2npsD was found. |
|
Region A: Residues: [233-323] |
1 11 21 31 41 51
| | | | | |
1 MIQGQDEQLD MISDSIGTLK TVSRQIGVEL DEQAVMLDDF GNEFDTTESK LDTTMKKVAK 60
61 VLHMNNDKRQ WAAILILSGL LLFVIILFII L
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 2npsD |
| Description: | No description for 2npsD was found. |
