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View Structure Prediction Details

Protein: CG11883-PA
Organism: Drosophila melanogaster
Length: 732 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11883-PA.

Description E-value Query
Range
Subject
Range
gi|220956804 - gi|220956804|gb|ACL90945.1| CG11883-PB [synthetic construct]
CG11883-PB - This gene is referred to in FlyBase by the symbol Dmel\CG11883 (CG11883, FBgn0033538). It is a prote...
563.0 [0..1] [713..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQSSNPNFR SLDLSLGTPT PTTPTSSEIP AAPASATASL SGSTLQFGPE EPEEGSAAGG  60
   61 SQSLTPLDAR ELLTRPTRAY ASVSQPQSPR HRGSGCGS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-603]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSGSRIITHG LTGRSTSISS QLEKTKKLLK MTEGEDKPLT ILHYNDVYNI ESMAETEPVG  60
   61 GAARFATAIK SFAHLNPLVL FSGDAFSPSM LSTFTQGEQM IPVLNTVGTH CAVFGNHDFD 120
  121 HGLDVLVKLI KQTEFPWLMS NVVDNETGRP LGGGKISHFI LHNQISIGLI GLVEREWLET 180
  181 LPTIDPNEVT YIDYVEAGNK LARELRNEGC DLIIALTHMR TPNDINLAEK CNGIDIILGG 240
  241 HDHVREVTEI NGKMIVKSGT DFQQFSVITI ERDAANREHF TTDVKCFDVT AKIPEDPELK 300
  301 QELSKYAKFI ESKLSDVMGV FSVELDGRFS RVRTQETNLG NWVCDVVLAA VGADVVILNG 360
  361 GTFRSDRVHP VGAFTMGDLV NVIPMRDPLI LLEVKGKILW QALENGVSAY PKLEGRFPQV 420
  421 SGISFAFDPQ AEPGKRIDPQ LIQVGDEYLN LEQSYKLCVK SYIFMGCDGY TMFKDATVLM 480
  481 DDDACPELGI TLQNHFKAIN SRKCG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 1ushA
Description: 5'-NUCLEOTIDASE FROM E. COLI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 6.90309911517124 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.76617976580319 bayes_pls_golite062009
phosphatase activity 6.28072946025083 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.93537144836081 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.11265802430394 bayes_pls_golite062009
hydrolase activity 2.06280293513737 bayes_pls_golite062009
catalytic activity 1.39852585255405 bayes_pls_golite062009
binding 0.607014751804583 bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase activity 0.598330833036731 bayes_pls_golite062009
protein kinase activity 0.55395641922978 bayes_pls_golite062009
signal transducer activity 0.541715460439478 bayes_pls_golite062009
molecular transducer activity 0.541715460439478 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.395006104431866 bayes_pls_golite062009
kinase activity 0.366390322110727 bayes_pls_golite062009
protein binding 0.184079020957384 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.39246790349923E-4 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [604-732]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNTKHRQSLV TLSRRHSLVQ CLDSMDLDGP SPIRKLSVGH HNKSMDLTHG NSQKMLRRAS  60
   61 LDDLEQSTCD LAPQLEHRIV MIQNEEHHRQ LLFKKETHIM NSTITEAEDD YKKIRQIDLG 120
  121 TGSDVERNI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle