| Protein: | Pkn-PF |
| Organism: | Drosophila melanogaster |
| Length: | 1205 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pkn-PF.
| Description | E-value | Query Range |
Subject Range |
|
|
927.0 | [0..20] | [1205..5] |
|
Region A: Residues: [1-354] |
1 11 21 31 41 51
| | | | | |
1 MALTMNMVFL KDLRSRLKGY LHGEYIKHPV LYELSHKYGF TENLPESCMS IRLEEIKEAI 60
61 RREIRKELKI KEGAEKLREV AKDRRSLSDV AVLVKKSKSK LAELKSELQE LESQILLTSA 120
121 NTAVNSNGQE SITACIDPNG GFLVSGAVGG LGGGNTALEG GAPATANDKV LASLEKQLQI 180
181 EMKVKTGAEN MIQSLGIGCD KKLLAEAHQM LADSKAKIEF LRLRIIKVKQ NREQADRLKA 240
241 SRQMIDEHGQ TIGGNNSSQP QSLETTLEER IEELRHRLRI EAAVVDGAKN VIRTLQTANR 300
301 APDKKALQEA HGRLSESSRK LDLLRYSLDL RRQELPADSP AAQQLKTELQ IVQL
|
| Detection Method: |  |
| Confidence: | 24.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [355-420] |
1 11 21 31 41 51
| | | | | |
1 STSPAPVTYT SLQSGQAGIL GGKPYQSVSS LGRCASVTGK LEVRLLGCQD LLEDVPGRSR 60
61 RDKDNN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [421-610] |
1 11 21 31 41 51
| | | | | |
1 SSPGDLRSFV KGVTSRSSSK SYSVKDETSI EIMAVIKLDN ITVGQTSWKQ CSQQAWDQRF 60
61 SIDLDRSREL EIGVYWRDWR SLCAVKVLRL EEFIDDVRHG MALQLEPQGL LFAEVKFLNP 120
121 MISQKPKLRR QRMIFNRQQA KNISRAKQMN INVATWGRLL KRNAPNHVHM GSAGSGSSLT 180
181 GSSPMVVGGS
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1gmiA |
| Description: | Domain from protein kinase C epsilon |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| calcium-dependent phospholipid binding | 3.93415448210371 | bayes_pls_golite062009 |
| binding | 2.77482286467294 | bayes_pls_golite062009 |
| phospholipid binding | 2.74013385479058 | bayes_pls_golite062009 |
| neurexin binding | 1.99616093461872 | bayes_pls_golite062009 |
| lipid binding | 1.79802914584378 | bayes_pls_golite062009 |
| protein binding | 1.33917246836907 | bayes_pls_golite062009 |
| receptor activity | 1.33810899162617 | bayes_pls_golite062009 |
| transporter activity | 1.2628067945512 | bayes_pls_golite062009 |
| signal transducer activity | 1.10701462579828 | bayes_pls_golite062009 |
| molecular transducer activity | 1.10701462579828 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.816751946072324 | bayes_pls_golite062009 |
| SNARE binding | 0.3731056408292 | bayes_pls_golite062009 |
| profilin binding | 0.32399339703241 | bayes_pls_golite062009 |
| syntaxin-1 binding | 0.273890767897551 | bayes_pls_golite062009 |
| calmodulin binding | 0.26906635924237 | bayes_pls_golite062009 |
| receptor binding | 0.189665306346323 | bayes_pls_golite062009 |
|
Region A: Residues: [611-1139] |
1 11 21 31 41 51
| | | | | |
1 RDSESPISRT PSSDALVEPE PYTPGEQAQN LEFDPDAGIN EHVETPGEYP DPAASGLSGM 60
61 RPLSMHMQGI SVLPPESPPV ATGAAGRPNT LSLQMPGASK GQVIQGGRTA APTTAPPPPP 120
121 VLKATSTTPI LDQEVIPQLG KLYVGSSQQQ YAQQSSPIIQ EPATPTIYGN SAAAGAPQFP 180
181 QPAQRQEKQP PQQQPIYANQ YELNVAKAAA AASVYSPSSS TTSNSNQQQQ QQRRNVARGL 240
241 QYRESGGLET GRAGKQPPNA GMLSMDNFRL LSVLGRGHFG KVILSQLRSN NQYYAIKALK 300
301 KGDIIARDEV ESLLSEKRIF EVANAMRHPF LVNLYSCFQT EQHVCFVMEY AAGGDLMMHI 360
361 HTDVFLEPRA VFYAACVVLG LQYLHENKII YRDLKLDNLL LDTEGYVKIA DFGLCKEGMG 420
421 FGDRTGTFCG TPEFLAPEVL TETSYTRAVD WWGLGVLIFE MLVGESPFPG DDEEEVFDSI 480
481 VNDEVRYPRF LSLEAIAVMR RLLRKNPERR LGSSERDAED VKKQAFFRS
|
| Detection Method: | |
| Confidence: | 55.39794 |
| Match: | 2h8hA |
| Description: | No description for 2h8hA was found. |
|
Region A: Residues: [1140-1205] |
1 11 21 31 41 51
| | | | | |
1 IVWDDLLLRK VKPPFVPTIN HLEDVSNFDE EFTSEKAQLT PPKEPRHLTE EEQLLFQDFS 60
61 YTAEWC
|
| Detection Method: | |
| Confidence: | 101.0 |
| Match: | 2jdoA |
| Description: | No description for 2jdoA was found. |
