| Protein: | Pkn-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1190 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pkn-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
890.0 | [0..5] | [1190..20] |
|
Region A: Residues: [1-323] |
1 11 21 31 41 51
| | | | | |
1 MSDSYYQGEY IKHPVLYELS HKYGFTENLP ESCMSIRLEE IKEAIRREIR KELKIKEGAE 60
61 KLREVAKDRR SLSDVAVLVK KSKSKLAELK SELQELESQI LLTSANTAVN SNGQESITAC 120
121 IDPNGGFLVS GAVGGLGGGN TALEGGAPAT ANDKVLASLE KQLQIEMKVK TGAENMIQSL 180
181 GIGCDKKLLA EAHQMLADSK AKIEFLRLRI IKVKQNREQA DRLKASRQMI DEHGQTIGGN 240
241 NSSQPQSLET TLEERIEELR HRLRIEAAVV DGAKNVIRTL QTANRAPDKK ALQEAHGRLS 300
301 ESSRKLDLLR YSLDLRRQEL PAD
|
| Detection Method: |  |
| Confidence: | 22.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [324-419] |
1 11 21 31 41 51
| | | | | |
1 SPAAQQLKTE LQIVQLSTSP APVTYTSLQS GQAGILGGKP YQSVSSLGRC ASVTGKLEVR 60
61 LLGCQDLLED VPGRSRRDKD NNSSPGDLRS FVKGVT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [420-595] |
1 11 21 31 41 51
| | | | | |
1 SRSSSKSYSV KDETSIEIMA VIKLDNITVG QTSWKQCSQQ AWDQRFSIDL DRSRELEIGV 60
61 YWRDWRSLCA VKVLRLEEFI DDVRHGMALQ LEPQGLLFAE VKFLNPMISQ KPKLRRQRMI 120
121 FNRQQAKNIS RAKQMNINVA TWGRLLKRNA PNHVHMGSAG SGSSLTGSSP MVVGGS
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 2fk9A |
| Description: | Human protein kinase C, eta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [596-1124] |
1 11 21 31 41 51
| | | | | |
1 RDSESPISRT PSSDALVEPE PYTPGEQAQN LEFDPDAGIN EHVETPGEYP DPAASGLSGM 60
61 RPLSMHMQGI SVLPPESPPV ATGAAGRPNT LSLQMPGASK GQVIQGGRTA APTTAPPPPP 120
121 VLKATSTTPI LDQEVIPQLG KLYVGSSQQQ YAQQSSPIIQ EPATPTIYGN SAAAGAPQFP 180
181 QPAQRQEKQP PQQQPIYANQ YELNVAKAAA AASVYSPSSS TTSNSNQQQQ QQRRNVARGL 240
241 QYRESGGLET GRAGKQPPNA GMLSMDNFRL LSVLGRGHFG KVILSQLRSN NQYYAIKALK 300
301 KGDIIARDEV ESLLSEKRIF EVANAMRHPF LVNLYSCFQT EQHVCFVMEY AAGGDLMMHI 360
361 HTDVFLEPRA VFYAACVVLG LQYLHENKII YRDLKLDNLL LDTEGYVKIA DFGLCKEGMG 420
421 FGDRTGTFCG TPEFLAPEVL TETSYTRAVD WWGLGVLIFE MLVGESPFPG DDEEEVFDSI 480
481 VNDEVRYPRF LSLEAIAVMR RLLRKNPERR LGSSERDAED VKKQAFFRS
|
| Detection Method: | |
| Confidence: | 62.522879 |
| Match: | 2h8hA |
| Description: | No description for 2h8hA was found. |
| Term | Confidence | Notes |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
|
Region A: Residues: [1125-1190] |
1 11 21 31 41 51
| | | | | |
1 IVWDDLLLRK VKPPFVPTIN HLEDVSNFDE EFTSEKAQLT PPKEPRHLTE EEQLLFQDFS 60
61 YTAEWC
|
| Detection Method: | |
| Confidence: | 105.0 |
| Match: | 2i0eA |
| Description: | No description for 2i0eA was found. |
