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View Structure Prediction Details

Protein: CG3194-PA
Organism: Drosophila melanogaster
Length: 614 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3194-PA.

Description E-value Query
Range
Subject
Range
gi|125806720|ref... - GA16581-PA [Drosophila pseudoobscura], GA16581 [Drosophila pseudoobscura pseudoobscura]
gi|54635308, gi|... - gi|54635308|gb|EAL24711.1| GA16581 [Drosophila pseudoobscura pseudoobscura], gi|125806720|ref|XP_001...
978.0 [0..1] [614..1]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKYLSSQRD ALSAPALPVS RENREPPKFQ GVKQREPLVF FIMRLNLKAV LLVLTVAVVV  60
   61 ITLGVYMRCA AFS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSPDFVRPLD RSARQSSSGG EATALHDIEC SINQEYTVHC KRDENANEVY VPFSFLRNYF  60
   61 DVSGAVSTNS NEVAKFNWVH STAKVNLPRG KYDARGVYMY FENYNVEVRD RVKCISAAEG 120
  121 VPVSTQWEKR GYFYPTQIAQ FALSHYSKNL TEPAPRVRVL EDGDGNQMEW STPKTSNMTR 180
  181 IWHHKFNTSV VQFETA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.975
Match: 1jpeA
Description: Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.585392957294978 bayes_pls_golite062009
intramolecular oxidoreductase activity 0.091049936046018 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [270-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGYEGVISIA LNQTLDLLLS VDLLLVTNSS SLMITVQNRD TRHNYSLHYI PADLLLSVQD  60
   61 TNIYYGLGGS ALNKWRHITR DLHIDLQKGI MGDKRSPLKI RRSDLEVISI GFLGLGFFDN 120
  121 ITLSTSDHLA HFYDAAEWFV HNQDPKTGGW TNPVRRSLNG FAELRPGWIS AMGQGHAISV 180
  181 LARAYWHSGG DERYLRAAAA GLQPYRVYSR DGGVLAQFMD KF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [492-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YWYEEYPTTP PSYVLNGFIY SLLGLYDLNS TAPGKIAREA GKLFAQGMHS LKKMLLLFDT  60
   61 GSGTSYDLRH LSLGVAPNLA RWDYHATHVN QLLLLATIDS DPLIAQTAER WKGYMFGRRA 120
  121 KHN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle