YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG3194-PA
Organism: Drosophila melanogaster
Length: 614 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3194-PA.

Description E-value Query
Range
Subject
Range
gi|125806720|ref... - GA16581-PA [Drosophila pseudoobscura], GA16581 [Drosophila pseudoobscura pseudoobscura]
gi|54635308, gi|... - gi|54635308|gb|EAL24711.1| GA16581 [Drosophila pseudoobscura pseudoobscura], gi|125806720|ref|XP_001...
978.0 [0..1] [614..1]

Back

Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKYLSSQRD ALSAPALPVS RENREPPKFQ GVKQREPLVF FIMRLNLKAV LLVLTVAVVV  60
   61 ITLGVYMRCA AFS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSPDFVRPLD RSARQSSSGG EATALHDIEC SINQEYTVHC KRDENANEVY VPFSFLRNYF  60
   61 DVSGAVSTNS NEVAKFNWVH STAKVNLPRG KYDARGVYMY FENYNVEVRD RVKCISAAEG 120
  121 VPVSTQWEKR GYFYPTQIAQ FALSHYSKNL TEPAPRVRVL EDGDGNQMEW STPKTSNMTR 180
  181 IWHHKFNTSV VQFETA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.975
Match: 1jpeA
Description: Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.585392957294978 bayes_pls_golite062009
intramolecular oxidoreductase activity 0.091049936046018 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [270-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGYEGVISIA LNQTLDLLLS VDLLLVTNSS SLMITVQNRD TRHNYSLHYI PADLLLSVQD  60
   61 TNIYYGLGGS ALNKWRHITR DLHIDLQKGI MGDKRSPLKI RRSDLEVISI GFLGLGFFDN 120
  121 ITLSTSDHLA HFYDAAEWFV HNQDPKTGGW TNPVRRSLNG FAELRPGWIS AMGQGHAISV 180
  181 LARAYWHSGG DERYLRAAAA GLQPYRVYSR DGGVLAQFMD KF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [492-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YWYEEYPTTP PSYVLNGFIY SLLGLYDLNS TAPGKIAREA GKLFAQGMHS LKKMLLLFDT  60
   61 GSGTSYDLRH LSLGVAPNLA RWDYHATHVN QLLLLATIDS DPLIAQTAER WKGYMFGRRA 120
  121 KHN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle