YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG10417-PB, CG10...
Organism: Drosophila melanogaster
Length: 662 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10417-PB, CG10....

Description E-value Query
Range
Subject
Range
gi|118787715, gi... - gi|118787715|ref|XP_316230.3| ENSANGP00000017684 [Anopheles gambiae str. PEST], gi|116126935|gb|EAA1...
301.0 [0..1] [565..1]

Back

Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAYLSHPKT DKTSTDQFNE LLAVGASSMQ GWRNSQEDAH NSILNFDNNT SFFAVYDGHG  60
   61 GAEVAQYCAD KLPHFLKNLE TYKNGQFEVA LKEAFLGFDK TLLDPSIVSI LKILAGEHNF 120
  121 VDAEADDYEE EDLAELQEES NLPLNEVLEK YKGLPQKKDL DLKSSDHKEN FKMRSPYFRG 180
  181 RRAAALAAEA TNKAVMDPSA KPDGSSTSAA AAAAALSADG VANSRNPSNV VNPMAGADSN 240
  241 TTTSINDLST KNAALKDDSV NDQNEGSNGT DFKHTLVSSS NKKLFATGSN DMTELNQSSK 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.61
Match: 1a6qA
Description: CRYSTAL STRUCTURE OF THE PROTEIN SERINE/THREONINE PHOSPHATASE 2C AT 2 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 6.35232293014958 bayes_pls_golite062009
phosphatase activity 5.67573714678256 bayes_pls_golite062009
phosphoric ester hydrolase activity 5.51583374712505 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 4.95568220594262 bayes_pls_golite062009
protein serine/threonine phosphatase activity 4.44500030592171 bayes_pls_golite062009
hydrolase activity 3.7859692117405 bayes_pls_golite062009
catalytic activity 1.79275416583237 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [301-572]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEFTNSSTSK EFERNINSSQ DDEFTDDDAD YEENDNVKSP DTSSAESSDC TENDDDGDED  60
   61 GNEDSDEEET DEDQMANDNF CANMIEEPGK DSGCTAVVCL LQGRDLYVAN AGDSRCVISR 120
  121 SGQAIEMSID HKPEDDEEAS RIIKAGGRVT LDGRVNGGLN LSRALGDHAY KTNVTLPAEE 180
  181 QMISALPDIK KLIITPEDEF MVLACDGIWN YMSSEEVVEF VRCRLKDNKK LSTICEELFD 240
  241 NCLAPNTMGD GTGCDNMTAV IVQFKKKLQE LQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.221849
Match: 2i0oA
Description: No description for 2i0oA was found.

Predicted Domain #3
Region A:
Residues: [573-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STIPPNQTED KLLKTSENVS HSLNDQSASK RCASQNADAD DEILEKNNSK RLKTDLEQEN  60
   61 IKDRTPSPSN QNEDPTQKAI KEVTIIVSSS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle