| Protein: | LEG2_RAT |
| Organism: | Rattus norvegicus |
| Length: | 130 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEG2_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
161.0 | [0..3] | [130..16] |
|
|
161.0 | [0..3] | [130..12] |
|
|
160.0 | [0..3] | [129..16] |
|
|
159.0 | [0..1] | [130..14] |
|
|
158.0 | [0..3] | [130..15] |
|
|
158.0 | [0..3] | [130..16] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MSEKFEVTNL NMKSGMSLKI KGKIHNDVNS FTINLGQGKE TLNLHFNPRF NESTIVCNTL 60
61 DGSSWGQEQR ENHSCFSPGS EVKLTLTFQD KDFKVTLPDG HSLTFPNRLG HNHLRYLSMD 120
121 GLQISSFKLE
|
| Detection Method: |  |
| Confidence: | 31.69897 |
| Match: | 1hlcA |
| Description: | S-lectin, different isoforms |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sugar binding | 3.34064405064299 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.70103238455595 | bayes_pls_golite062009 |
| binding | 2.40096962515027 | bayes_pls_golite062009 |
| polysaccharide binding | 2.35851723238763 | bayes_pls_golite062009 |
| monosaccharide binding | 2.09529521879228 | bayes_pls_golite062009 |
| carbohydrate binding | 1.90829797790335 | bayes_pls_golite062009 |
| protein binding | 1.80794638640093 | bayes_pls_golite062009 |
| heparin binding | 1.60966215355794 | bayes_pls_golite062009 |
| extracellular matrix binding | 1.41229380365824 | bayes_pls_golite062009 |
| fibronectin binding | 1.10309233016451 | bayes_pls_golite062009 |
| galactoside binding | 1.08479183125487 | bayes_pls_golite062009 |
| pattern binding | 0.969915174528009 | bayes_pls_golite062009 |
| receptor binding | 0.9012250808046 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.5068011550246 | bayes_pls_golite062009 |
| transcription regulator activity | 0.372701974560119 | bayes_pls_golite062009 |
| nucleic acid binding | 0.216086300988177 | bayes_pls_golite062009 |
| DNA binding | 0.157628282318248 | bayes_pls_golite062009 |
| growth factor activity | 0.119475011376319 | bayes_pls_golite062009 |
| fibroblast growth factor 2 binding | 0.0714976455077903 | bayes_pls_golite062009 |
| fibrinogen binding | 0.0714976455077903 | bayes_pls_golite062009 |
