| Protein: | gi|114614624 |
| Organism: | Pan troglodytes |
| Length: | 608 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114614624.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [8..607] | [1155..1703] |
|
|
0.0 | [31..607] | [949..1479] |
|
|
0.0 | [35..607] | [570..1096] |
|
|
0.0 | [35..607] | [1091..1615] |
|
|
0.0 | [18..607] | [146..693] |
|
Region A: Residues: [1-608] |
1 11 21 31 41 51
| | | | | |
1 MSDKSDLKAE LERKKQRLAQ IREEKKRKEE ERKKKEADMQ QKKEPVQDDS DLDRKRRETE 60
61 ALLQSIGISP EPPLVPTPMS PSSKSVSTPS EAGSQDSGDL GPLTRRRLHK LGVSKVTQVD 120
121 FLPREVVSYS KETQTPLATH QSEEDEEDEE MVESKVGQDS ELENQDKKQE VKEAPPRELT 180
181 EEEKQQILHS EEFLIFFDRT IRVIERALAE DSDIFFDYSG RELEEKDGDV QAGANLSFNR 240
241 QFYDEHWSKH RVVTCMDWSL QYPELMVASY NNNEDAPHEP DGVALVWNMK FKKTTPEYVF 300
301 HCQSSVMSVC FARFHPNLVV GGTYSGQIVL WDNRSHRRTP VQRTPLSAAA HTHPVYCVNV 360
361 VGTQNAHNLI TVSTDGKMCS WSLDMLSTPQ ESMELVYNKS KPVAVTGMAF PTGDVNNFVV 420
421 GSEEGTVYTA CRHGSKAGIG EVFEGHQGPV TGINCHMAVG PIDFSHLFVT SSFDWTVKLW 480
481 TTKHNKPLYS FEDNADYVYD VMWSPVHPAL FACVDGMGRL DLWNLNNDTE VPTASVAIEG 540
541 ASALNRVRWA QAGKEVAVGD SEGRIWVYDV GELAVPHNDE WTRFARTLVE IRANRADSEE 600
601 EGTVELSA
|
| Detection Method: |  |
| Confidence: | 44.045757 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.31804728298431 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| binding | 1.8484919978091 | bayes_pls_golite062009 |
| dynein binding | 1.73730057055973 | bayes_pls_golite062009 |
| dynactin binding | 1.73605140030915 | bayes_pls_golite062009 |
| actin filament binding | 1.5197243426595 | bayes_pls_golite062009 |
| protein binding | 1.24173112731149 | bayes_pls_golite062009 |
| dynein heavy chain binding | 0.894931976836991 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 0.707581908546932 | bayes_pls_golite062009 |
| transporter activity | 0.692270256454453 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.121183207943714 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
