| Protein: | gi|125543425 |
| Organism: | Oryza sativa Indica Group |
| Length: | 508 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125543425.
| Description | E-value | Query Range |
Subject Range |
|
|
511.0 | [0..1] | [508..1] |
|
Region A: Residues: [1-282] |
1 11 21 31 41 51
| | | | | |
1 MDGNAKGGGH SEALKNYNLG RTLGIGSFGK VKIAEHKLTG HRVAIKILNR RQMRNMEMEE 60
61 KAKREIKILR LFIHPHIIRL YEVIYTPTDI YVVMEYCKFG ELFDYIVEKG RLQEDEARRI 120
121 FQQIISGVEY CHRNMVVHRD LKPENLLLDS KYNVKLADFG LSNVMHDGHF LKTSCGSPNY 180
181 AAPEVISGKL YAGPEVDVWS CGVILYALLC GTLPFDDENI PNLFKKIKGG IYTLPSHLSA 240
241 LARDLIPRML VVDPMKRITI REIREHQWFQ IRLPRYLAVP PP
|
| Detection Method: |  |
| Confidence: | 79.522879 |
| Match: | 2h6dA |
| Description: | No description for 2h6dA was found. |
|
Region A: Residues: [283-340] |
1 11 21 31 41 51
| | | | | |
1 DTAQQAKMID EDTLQDVVNL GYGKDHVCES LRNRLQNEAT VAYYLLLDNR FRATSGYL
|
| Detection Method: | |
| Confidence: | 1.11 |
| Match: | 2cpwA |
| Description: | Solution structure of RSGI RUH-031, a UBA domain from human cDNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.36949910682766 | bayes_pls_golite062009 |
| binding | 2.36429435103114 | bayes_pls_golite062009 |
| nucleic acid binding | 2.22074627311461 | bayes_pls_golite062009 |
| protein binding | 2.06619290708535 | bayes_pls_golite062009 |
| DNA binding | 2.0124319122573 | bayes_pls_golite062009 |
| enzyme binding | 0.973545763884891 | bayes_pls_golite062009 |
| kinase binding | 0.968076648791321 | bayes_pls_golite062009 |
| small conjugating protein binding | 0.678408535705177 | bayes_pls_golite062009 |
| protein kinase binding | 0.608887392085144 | bayes_pls_golite062009 |
| ubiquitin binding | 0.319972124839967 | bayes_pls_golite062009 |
| catalytic activity | 0.2736776367506 | bayes_pls_golite062009 |
| transcription factor binding | 0.00604949932390486 | bayes_pls_golite062009 |
|
Region A: Residues: [341-508] |
1 11 21 31 41 51
| | | | | |
1 GADYQESLER NFNRFASSES ASSNTRHYLP GSSDPHASGL RPHYPVERKW ALGLQSRAQP 60
61 REIMIEVLKA LQDLNVSWKK NGQYNMKCRW SVGTQATDML DVNNSFVDDS IIMDNGDVNG 120
121 RLPAVIKFEI QLYKTRDEKY LLDMQRVTGP QLLFLDFCAD FLTKLRVL
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 2qlvA |
| Description: | No description for 2qlvA was found. |
