| Protein: | gi|117646404, gi... |
| Organism: | synthetic construct |
| Length: | 252 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|117646404, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..252] | [1..252] |
|
|
0.0 | [1..252] | [1..252] |
|
|
9.0E-97 | [1..252] | [1..262] |
|
|
3.0E-95 | [1..252] | [1..252] |
|
|
3.0E-95 | [1..252] | [1..262] |
|
|
2.0E-86 | [1..252] | [1..252] |
|
|
2.0E-77 | [1..247] | [1..252] |
|
Region A: Residues: [1-252] |
1 11 21 31 41 51
| | | | | |
1 MGSELIGRLA PRLGLAEPDM LRKAEEYLRL SRVKCVGLSA RTTETSSAVM CLDLAASWMK 60
61 CPLDRAYLIK LSGLNKETYQ SCLKSFECLL GLNSNIGIRD LAVQFSCIEA VNMASKILKS 120
121 YESSLPQTQQ VDLDLSRPLF TSAALLSACK ILKLKVDKNK MVATSGVKKA IFDRLCKQLE 180
181 KIGQQVDREP GDVATPPRKR KKIVVEAPAK EMEKVEEMPH KPQKDEDLTQ DYEEWKRKIL 240
241 ENAASAQKAT AE
|
| Detection Method: |  |
| Confidence: | 1.41 |
| Match: | 1tfbA |
| Description: | NMR STUDIES OF HUMAN GENERAL TRANSCRIPTION FACTOR TFIIB: DYNAMICS AND INTERACTION WITH VP16 ACTIVATION DOMAIN, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.75688185850223 | bayes_pls_golite062009 |
| binding | 2.37916921859542 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.37399236069363 | bayes_pls_golite062009 |
| nucleic acid binding | 2.06743451505655 | bayes_pls_golite062009 |
| DNA binding | 1.95321993038755 | bayes_pls_golite062009 |
| transcription repressor activity | 1.41828738664896 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase regulator activity | 1.41497909264171 | bayes_pls_golite062009 |
| protein binding | 1.37207701115974 | bayes_pls_golite062009 |
| transcription factor activity | 1.22628491144894 | bayes_pls_golite062009 |
| protein kinase regulator activity | 1.21941169140389 | bayes_pls_golite062009 |
| kinase regulator activity | 1.18590233040331 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.962670695182671 | bayes_pls_golite062009 |
| transcription factor binding | 0.655253705928308 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.461517963237846 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.0843751392410543 | bayes_pls_golite062009 |
| transcription activator activity | 0.0606514459376675 | bayes_pls_golite062009 |
