| Protein: | gi|94401105, gi|... |
| Organism: | Mus musculus |
| Length: | 165 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|94401105, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..1] | [152..1] |
|
|
299.0 | [0..1] | [165..1] |
|
|
296.0 | [0..1] | [152..1] |
|
|
292.0 | [0..1] | [152..150] |
|
|
284.0 | [0..1] | [165..1] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MLMPKKNRIA IYELLFKEGV MVAKKDVHMP KHPELADKNV PNLHVMKAMQ SLKSRGYVKE 60
61 QFAWRHFYWY LTNEGIQYLR DYLHLPPEIV PATLRRSRPE TGRPRPKGPE GERPARFTRG 120
121 EADRDTYRRS AVPPGADKKA EAGAGWATEF QFRGGFGHGR GQPPQ
|
| Detection Method: |  |
| Confidence: | 0.966 |
| Match: | 1ub9A |
| Description: | Structure of the transcriptional regulator homologue protein from Pyrococcus horikoshii OT3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 5.31568733625259 | bayes_pls_golite062009 |
| structural molecule activity | 5.08906334129014 | bayes_pls_golite062009 |
| transcription regulator activity | 3.15604421023994 | bayes_pls_golite062009 |
| nucleic acid binding | 3.03746013592931 | bayes_pls_golite062009 |
| DNA binding | 2.94000725003786 | bayes_pls_golite062009 |
| binding | 2.7993872466812 | bayes_pls_golite062009 |
| transcription factor activity | 2.26980753972323 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.948991080726164 | bayes_pls_golite062009 |
| protein binding | 0.933833716716586 | bayes_pls_golite062009 |
| transcription activator activity | 0.818477312720578 | bayes_pls_golite062009 |
| transcription repressor activity | 0.679859821399589 | bayes_pls_golite062009 |
| RNA binding | 0.352569950847387 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.205052011867554 | bayes_pls_golite062009 |
