| Protein: | SARNP_MOUSE |
| Organism: | Mus musculus |
| Length: | 210 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SARNP_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
254.0 | [0..9] | [210..761] |
|
|
245.0 | [0..9] | [210..575] |
|
|
197.0 | [0..2] | [210..26] |
|
|
195.0 | [0..1] | [209..8] |
|
|
193.0 | [0..1] | [210..1] |
|
|
189.0 | [0..1] | [210..1] |
|
|
175.0 | [0..1] | [210..1] |
|
|
174.0 | [0..1] | [197..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MAAETVELHK LKLAELKQEC LARGLETKGI KQDLINRLQA YLEDHAEEEA NEEDVLGDET 60
61 EEEEPKPIEL PVKEEEPPEK AVDMA
|
| Detection Method: |  |
| Confidence: | 11.0 |
| Match: | 2do1A |
| Description: | No description for 2do1A was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 3.41663142583782 | bayes_pls_golite062009 |
| DNA binding | 3.10342439340038 | bayes_pls_golite062009 |
| nucleic acid binding | 3.06883460395012 | bayes_pls_golite062009 |
| binding | 2.85946414867169 | bayes_pls_golite062009 |
| transcription factor binding | 1.87393007510949 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.74991817705903 | bayes_pls_golite062009 |
| protein binding | 1.4634286530239 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.38955445085215 | bayes_pls_golite062009 |
| transcription activator activity | 1.33699031660219 | bayes_pls_golite062009 |
| nuclear hormone receptor binding | 1.31532203831033 | bayes_pls_golite062009 |
| steroid hormone receptor binding | 1.2544110921647 | bayes_pls_golite062009 |
| transcription repressor activity | 1.11561194099552 | bayes_pls_golite062009 |
| androgen receptor binding | 1.09329256369933 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.96443772736777 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.960887033303381 | bayes_pls_golite062009 |
| hormone receptor binding | 0.81375575057479 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.64159955038729 | bayes_pls_golite062009 |
| SUMO ligase activity | 0.561855067386593 | bayes_pls_golite062009 |
| catalytic activity | 0.454272578060498 | bayes_pls_golite062009 |
| chromatin binding | 0.00223433238629989 | bayes_pls_golite062009 |
|
Region A: Residues: [86-210] |
1 11 21 31 41 51
| | | | | |
1 SEKKVVKITS GIPQTERMQK RAERFNVPVS LESKKAARAA RFGISSVPTK GLSSDTKPMV 60
61 NLDKLKERAQ RFGLNVSSIS RKSEDDEKLK KRKERFGIVT SSAGTGTTED TEAKKRKRAE 120
121 RFGIA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.286 | 0.004 | regulation of translation | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.236 | 0.002 | regulation of translation | c.78.1 | Aspartate/ornithine carbamoyltransferase |
