| Protein: | C209A_MOUSE |
| Organism: | Mus musculus |
| Length: | 238 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C209A_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
188.0 | [0..1] | [238..1] |
|
|
184.0 | [0..1] | [238..1] |
|
|
182.0 | [0..1] | [235..1] |
|
|
175.0 | [0..6] | [235..186] |
|
|
175.0 | [0..1] | [235..1] |
|
|
175.0 | [0..6] | [235..163] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MSDSKEMGKR QLRPLDEELL TSSHTRHSIK GFGFQTNSGF SSFTGCLVHS QVPLALQVLF 60
61 LAVCSVLLVV ILVKVYKIPS SQEENNQMNV Y
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [92-238] |
1 11 21 31 41 51
| | | | | |
1 QELTQLKAGV DRLCRSCPWD WTHFQGSCYF FSVAQKSWND SATACHNVGA QLVVIKSDEE 60
61 QNFLQQTSKK RGYTWMGLID MSKESTWYWV DGSPLTLSFM KYWSKGEPNN LGEEDCAEFR 120
121 DDGWNDTKCT NKKFWICKKL STSCPSK
|
| Detection Method: | |
| Confidence: | 32.522879 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 1.36045055857751 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.10703123577063 | bayes_pls_golite062009 |
| signal transducer activity | 0.715762096994006 | bayes_pls_golite062009 |
| molecular transducer activity | 0.715762096994006 | bayes_pls_golite062009 |
| binding | 0.656008673432897 | bayes_pls_golite062009 |
