| Protein: | TDGF1_MOUSE |
| Organism: | Mus musculus |
| Length: | 171 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TDGF1_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
162.0 | [0..12] | [170..1576] |
|
|
162.0 | [0..7] | [132..4036] |
|
|
159.0 | [0..25] | [167..1359] |
|
|
152.0 | [0..21] | [170..3993] |
|
|
149.0 | [0..1] | [170..5125] |
|
|
149.0 | [0..5] | [170..1247] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MGYFSSSVVL LVAISSAFEF GPVAGRDLAI RDNSIWDQKE PAVRDRSFQF VPSVGIQNSK 60
61 SLNKTCCLNG GTCILGSFCA CPPSFYGRNC EHDVRKEHCG SILHGTWLPK KCSLCRCWHG 120
121 QLHCLPQTFL PGCDGHVMDQ DLKASRTPCQ TPSVTTTFML AGACLFLDMK V
|
| Detection Method: |  |
| Confidence: | 6.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ErbB-2 class receptor binding | 6.03999755532215 | bayes_pls_golite062009 |
| growth factor activity | 4.72461268561406 | bayes_pls_golite062009 |
| receptor binding | 4.33045214660893 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 3.49243532917035 | bayes_pls_golite062009 |
| heparin binding | 3.18889412817519 | bayes_pls_golite062009 |
| transcription regulator activity | 3.10404768355447 | bayes_pls_golite062009 |
| protein binding | 3.02592228806142 | bayes_pls_golite062009 |
| binding | 2.97929690141955 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 2.81761382193046 | bayes_pls_golite062009 |
| polysaccharide binding | 2.79319890241656 | bayes_pls_golite062009 |
| transcription factor binding | 2.07092884468733 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.96338152927981 | bayes_pls_golite062009 |
| protein kinase activity | 1.77969944626081 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.46474396447414 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 1.45792086043869 | bayes_pls_golite062009 |
| pattern binding | 1.40261567769805 | bayes_pls_golite062009 |
| kinase activity | 1.38993132583838 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.36604280237149 | bayes_pls_golite062009 |
| glycoprotein binding | 1.26303225185938 | bayes_pls_golite062009 |
| signal transducer activity | 1.21257866727 | bayes_pls_golite062009 |
| molecular transducer activity | 1.21257866727 | bayes_pls_golite062009 |
| MAP kinase kinase activity | 0.856364436331474 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 0.44857826904729 | bayes_pls_golite062009 |
| carbohydrate binding | 0.37481112933019 | bayes_pls_golite062009 |
