| Protein: | RIO1_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 521 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIO1_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
245.0 | [0..82] | [476..300] |
|
|
244.0 | [0..82] | [476..300] |
|
|
244.0 | [0..31] | [480..383] |
|
|
242.0 | [0..101] | [470..312] |
|
|
241.0 | [0..142] | [478..182] |
|
|
241.0 | [0..53] | [479..229] |
|
|
241.0 | [0..57] | [456..313] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MVEELKNDAQ TNEEESEYSD FSDGSDNDYF REDDIDWNQA SSNYSARQEN FGNNSSKINS 60
61 VNDHVSTLSR YVNNIKLNDR FEAEGFRTRG LLILHTFTFS CLIVLTNKDK SSIKD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [116-521] |
1 11 21 31 41 51
| | | | | |
1 KSDRATSEQV LDPRTRMILL KLINNGTISE INGCISTGKE ANVYHATNED GKHFAIKIYK 60
61 TSILVFKDRD RYVSGEFRFR HGYNKRNPRK MVRLWAEKEI RNLKRVAAAG IPCPEPILLK 120
121 QHVLLMSFLG DKKGWAYPKL KDIDMTPGEA TKLYQLVARN MRILFHVCHL VHADLSEYNL 180
181 LYHKGKVYFI DVSQSVEHDH PQSIDFLRMD ILNISTFFRR LNAGCLSLPQ LFKFITEEGS 240
241 CEKEAMKTRL NAIYEEEPTT EEYEEEFLKT YVPRTLDEVY DIDRDTEIVN AGGVNSLVYK 300
301 HLLNTDFQKL DLNDTTKNQN DQILPNETSE SDDDANSISS MENEEERTSD SKSSAKQGKG 360
361 NGRAKETPEE KRARKKKTKE DKAEKRKSKI PKYEKKRKLK QSGRKK
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 1m7qA |
| Description: | MAP kinase p38 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 2.68629765438914 | bayes_pls_golite062009 |
| protein kinase activity | 2.56362090019902 | bayes_pls_golite062009 |
| kinase activity | 2.46700969159892 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.17888523666192 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 1.66424140461588 | bayes_pls_golite062009 |
| transferase activity | 1.58037420753723 | bayes_pls_golite062009 |
| protein binding | 1.22565748038754 | bayes_pls_golite062009 |
| ATP binding | 0.261039303134118 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.215871730509016 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.199843476277027 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.016674711694129 | bayes_pls_golite062009 |
