| Protein: | gi|90399241 |
| Organism: | Oryza sativa Indica Group |
| Length: | 605 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|90399241.
| Description | E-value | Query Range |
Subject Range |
|
|
655.0 | [0..1] | [605..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MSPNLESHIK SQVPALLLRR FFGGAGRRRV FVQTETGCVL GMDLDRSDNA HTVKRRLQLA 60
61 LNVPTGETSL TFGDRVLEND LSFIRPDSPL LLTRNSINRS CSTPCLCPVS KDFEHKDRSG 120
121 LVEMLGCSIS CARVKRLVDD VVTAIRSG
|
| Detection Method: |  |
| Confidence: | 4.69897 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [149-246] |
1 11 21 31 41 51
| | | | | |
1 VDPVPIGSGL GGSYYFRNIS GDRVAIVKPT DEEPFAPNNP KGFVGRALGQ PGLKKSVRVG 60
61 ETGFREVAAY LLDHDNFANV PPTALVKITH SIFHINCP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [247-445] |
1 11 21 31 41 51
| | | | | |
1 VNGGSPAHDQ KQQVSSKIAS FQQFIAHDFD ASDHGTSSFP VAAVHRIGIL DIRIFNTDRH 60
61 AGNVLVRKLD GGTGRFGCQT ELFPIDHGLC LPENLEDPYF EWIHWAQSSI PFSEEELEYI 120
121 KNLDPMRDVA MLRRELPIIR EACLRVLVLC TIFLKEAAAS GLCLAEIGEM MTREFRGLEE 180
181 EPSKLEVVCM EARRKLAEW
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [446-605] |
1 11 21 31 41 51
| | | | | |
1 EPYSPVIEQG EDMDFQFSLD MLGEYNDVIR SPRFNGLGAK GNGFRNPLSK LVESIDEDND 60
61 DDDGRSESSK RSSERVHSGG LKFPSADKSS GSNGSVHALN RSADEQLPSS VYFVRLSDMN 120
121 AEEWNIFLEK FQELLKEALQ ERAAAAGQRM KQRLGTSCKF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
