| Protein: | UBXN1_MOUSE |
| Organism: | Mus musculus |
| Length: | 297 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBXN1_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
173.0 | [0..1] | [296..1] |
|
|
168.0 | [0..1] | [297..1] |
|
|
167.0 | [0..1] | [297..101] |
|
|
167.0 | [0..1] | [297..1] |
|
|
167.0 | [0..1] | [297..1] |
|
|
166.0 | [0..1] | [297..1] |
|
Region A: Residues: [1-58] |
1 11 21 31 41 51
| | | | | |
1 MAELTALESL IEMGFPRGRA EKALALTGNQ GIEAAMDWLM EHEDDPDVDE PLETPLSH
|
| Detection Method: |  |
| Confidence: | 14.30103 |
| Match: | 1whcA |
| Description: | Solution Structure of RSGI RUH-027, a UBA domain from Mouse cDNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.11397638448668 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.93085931991298 | bayes_pls_golite062009 |
| ubiquitin binding | 3.08647023955532 | bayes_pls_golite062009 |
| hydrolase activity | 2.88846002372004 | bayes_pls_golite062009 |
| small conjugating protein binding | 2.81291800174736 | bayes_pls_golite062009 |
| binding | 1.17122954376528 | bayes_pls_golite062009 |
| protein binding | 0.378700375319735 | bayes_pls_golite062009 |
| catalytic activity | 0.25774924710417 | bayes_pls_golite062009 |
|
Region A: Residues: [59-179] |
1 11 21 31 41 51
| | | | | |
1 VLGREPTPSE QVGPEGSGSA AGESRPILTE EERQEQTKRM LELVAQKQRE REEREEREAL 60
61 EREKQRRRQG QELSVARQKL QEDEMRRAAE ERRREKAEEL AARQRVREKI ERDKAERAKK 120
121 Y
|
| Detection Method: | |
| Confidence: | 1.01 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [180-297] |
1 11 21 31 41 51
| | | | | |
1 GGSVGSRSSP PATDPGPVPS SPSQEPPTKR EYDQCRIQVR LPDGTSLTQT FRAREQLAAV 60
61 RLYVELHRGE EPGQDQDPVQ LLSGFPRRAF SEADMERPLQ ELGLVPSAVL IVAKKCPS
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 1s3sG |
| Description: | Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 2.77871378503369 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 2.06714283858345 | bayes_pls_golite062009 |
| binding | 1.55392638191535 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.48147454986498 | bayes_pls_golite062009 |
| protein binding | 1.17197911794381 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.0818414663245 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.364036714119806 | bayes_pls_golite062009 |
