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View Structure Prediction Details

Protein: CG15539-PB
Organism: Drosophila melanogaster
Length: 509 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15539-PB.

Description E-value Query
Range
Subject
Range
gi|50749316 - gi|50749316|ref|XP_421583.1| PREDICTED: similar to Prolyl 4-hydroxylase alpha-1 subunit (4-PH alpha-...
353.0 [0..1] [508..1]

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Predicted Domain #1
Region A:
Residues: [1-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKLLISLAI LYLLVLVKSH SKPKILENNY AISIYDMSKL IDYEHYLLNI LQKFANALQK  60
   61 RVDTLEYYLE MTDYDREKNL AEDPIKHFRI TRRLHSDYVN WVWFMEEQPW GTLVKDIIAI 120
  121 APEMPTLKDV EEAIRGLRLI QWTYSLPTAE MAKGVLQDIH HNTSLDGMQC ITIARHMVNY 180
  181 KDFIRAKEWL MVGLKMYEAD EEIEYIYSQL GMPLVDFYEL FVEIQDELGS RYLAMSELQL 240
  241 AIKNWPEKVS LQRALSRLKM NIRIGKEPAE KKNKSKRVYK KCC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.30103
Match: 1w3bA
Description: The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
procollagen-proline 4-dioxygenase activity 7.0422525853653 bayes_pls_golite062009
procollagen-proline dioxygenase activity 7.0422525853653 bayes_pls_golite062009
peptidyl-proline dioxygenase activity 7.0422525853653 bayes_pls_golite062009
peptidyl-proline 4-dioxygenase activity 7.0422525853653 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 5.01373106146099 bayes_pls_golite062009
binding 2.09193012129784 bayes_pls_golite062009
protein binding 1.52807685989528 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor 0.534990536504941 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [284-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSECRPTAKL YCLYKTTSSY FLRLAPLKME LLSLDPYMVL FHDVVSDKDI VSIRNLTKGK  60
   61 LARTVTVSKD GNYTEDPDRT TKGTWLVENN ALIQRLSQLT QDMTNFDIHD ADPFQVLNYG 120
  121 IGGFYGIHFD FLEDAELDNF SDRIATAVFY LSDVPQGGAT IFPKLGLSVF PKKGSALLWY 180
  181 NLDHKGDGDN RTAHSACPTV VGSRWVMTKW INEREQIFRR PCLTSI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.5
Match: 2hbtA
Description: No description for 2hbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle