| Protein: | Dscam-PAK |
| Organism: | Drosophila melanogaster |
| Length: | 2032 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PAK.
| Description | E-value | Query Range |
Subject Range |
|
|
1514.0 | [0..3] | [2032..3] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60
61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
121 NQFGSIISRD VHVRAVVNQF YEAE
|
| Detection Method: |  |
| Confidence: | 78.0 |
| Match: | 2v5sA |
| Description: | No description for 2v5sA was found. |
|
Region A: Residues: [145-810] |
1 11 21 31 41 51
| | | | | |
1 IMTEYVIRGN AAVLKCSIPS FVADFVRVES WIDDEGNVLS FSDNYDGKYL VLPSGELHIR 60
61 EVGPEDGYKS YQCRTKHRLT GETRLSATKG RLVITEPVGS VAPKVDVKDR ITWLDKPMGQ 120
121 ALSLLCPAQS YPMPVYRWYK FIEGTTRKQA VVLNDRVKQV SGTLIIKDAV VEDSGKYLCV 180
181 VNNSVGGESV ETVLTVTAPL SAKIDPPTQT VDFGRPAVFT CQYTGNPIKT VSWMKDGKAI 240
241 GHSEPVLRIE SVKKEDKGMY QCFVRNDQES AEASAELKLG GRFDPPVIRQ AFQEETMEPG 300
301 PSVFLKCVAG GNPTPEISWE LDGKKIANND RYQVGQYVTV NGDVVSYLNI TSVHANDGGL 360
361 YKCIAKSKVG VAEHSAKLNV YGLPYIRQME KKAIVAGETL IVTCPVAGYP IDSIVWERDN 420
421 RALPINRKQK VFPNGTLIIE NVERNSDQAT YTCVAKNQEG YSARGSLEVQ VMVPPSIAPF 480
481 SFGDDPVNTG ENAGVQCMVQ KGDVPITIKW TLNSRPIING EEGITILKLS PKTSVLNIAA 540
541 VEQDHRGVFK CIAENKAGSS FTTSELKVNV PPRWILEPTD KAFAQGSDAK VECKADGFPK 600
601 PQVTWKKAVG DTPGEYKDLK KSDNIRVEEG TLHVDNIQKT NEGYYLCEAI NGIGSGLSAV 660
661 IMISVQ
|
| Detection Method: | |
| Confidence: | 59.0 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [811-997] |
1 11 21 31 41 51
| | | | | |
1 APPEFTEKLR NQTARRGEPA VLQCEAKGEK PIGILWNMNN MRLDPKNDNR YTIREEILST 60
61 GVMSSLSIKR TERSDSALFT CVATNAFGSD DASINMIVQE VPEMPYALKV LDKSGRSVQL 120
121 SWAQPYDGNS PLDRYIIEFK RSRASWSEID RVIVPGHTTE AQVQKLSPAT TYNIRIVAEN 180
181 AIGTSQS
|
| Detection Method: | |
| Confidence: | 36.69897 |
| Match: | 2nziA |
| Description: | No description for 2nziA was found. |
|
Region A: Residues: [998-1114] |
1 11 21 31 41 51
| | | | | |
1 SEAVTIITAE EAPSGKPQNI KVEPVNQTTM RVTWKPPPRT EWNGEILGYY VGYKLSNTNS 60
61 SYVFETINFI TEEGKEHNLE LQNLRVYTQY SVVIQAFNKI GAGPLSEEEK QFTAEGT
|
| Detection Method: | |
| Confidence: | 22.69897 |
| Match: | 1cfbA |
| Description: | CRYSTAL STRUCTURE OF TANDEM TYPE III FIBRONECTIN DOMAINS FROM DROSOPHILA NEUROGLIAN AT 2.0 ANGSTROMS |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1115-1702] |
1 11 21 31 41 51
| | | | | |
1 PSQPPSDTAC TTLTSQTIRV GWVSPPLESA NGVIKTYKVV YAPSDEWYDE TKRHYKKTAS 60
61 SDTVLHGLKK YTNYTMQVLA TTAGGDGVRS VPIHCQTEPD VPEAPTDVKA LVMGNAAILV 120
121 SWRPPAQPNG IITQYTVYSK AEGAETETKT QKVPHYQMSF EATELEKNKP YEFWVTASTT 180
181 IGEGQQSKSI VAMPSDQVPA KIASFDDTFT ATFKEDAKMP CLAVGAPQPE ITWKIKGVEF 240
241 SANDRMRVLP DGSLLIKSVN RQDAGDYSCH AENSIAKDSI THKLIVLAPP QSPHVTLSAT 300
301 TTDALTVKLK PHEGDTAPLH GYTLHYKPEF GEWETSEVSV DSQKHNIEGL LCGSRYQVYA 360
361 TGFNNIGAGE ASDILNTRTK GQKPKLPEKP RFIEVSSNSV SLHFKAWKDG GCPMSHFVVE 420
421 SKKRDQIEWN QISNNVKPDN NYVVLDLEPA TWYNLRITAH NSAGFTVAEY DFATLTVTGG 480
481 TIAPLDDGSG HGNVHTRIRL PAWMPEWLDL NFMVPLIATV VVVAVGICVV CVALSRRRAD 540
541 DMRGGQKDVY YDVVYNQTMG PGATLDKRRP DLRDELGYIA PPNRKLPP
|
| Detection Method: | |
| Confidence: | 25.0 |
| Match: | 2v5yA |
| Description: | No description for 2v5yA was found. |
|
Region A: Residues: [1703-1839] |
1 11 21 31 41 51
| | | | | |
1 VPGSNYNTCD RIKRGRGGLR SNHSTWDPRR NPNLYEELKA PPVPMHGNHY GHAHGNAECH 60
61 YRHPGMEDEI CPYATFHLLG FREEMDPTKA MNFQTFPHQN GHAGPVPGHA GTMLPPGHPG 120
121 HVHSRSGSQS MPRANRY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1840-2032] |
1 11 21 31 41 51
| | | | | |
1 QRKNSQGGQS SIYTPAPEYD DPANCAEEDQ YRRYTRVNSQ GGSLYSGPGP EYDDPANCAP 60
61 EEDQYGSQYG GPYGQPYDHY GSRGSMGRRS IGSARNPGNG SPEPPPPPPR NHDMSNSSFN 120
121 DSKESNEISE AECDRDHGPR GNYGAVKRSP QPKDQRTTEE MRKLIERNET GPKQLQLQQA 180
181 NGAGFTAYDT MAV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
