Protein: | Dscam-PAK |
Organism: | Drosophila melanogaster |
Length: | 2032 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PAK.
Description | E-value | Query Range |
Subject Range |
|
1514.0 | [0..3] | [2032..3] |
Region A: Residues: [1-144] |
1 11 21 31 41 51 | | | | | | 1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60 61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120 121 NQFGSIISRD VHVRAVVNQF YEAE |
Detection Method: | |
Confidence: | 78.0 |
Match: | 2v5sA |
Description: | No description for 2v5sA was found. |
Region A: Residues: [145-810] |
1 11 21 31 41 51 | | | | | | 1 IMTEYVIRGN AAVLKCSIPS FVADFVRVES WIDDEGNVLS FSDNYDGKYL VLPSGELHIR 60 61 EVGPEDGYKS YQCRTKHRLT GETRLSATKG RLVITEPVGS VAPKVDVKDR ITWLDKPMGQ 120 121 ALSLLCPAQS YPMPVYRWYK FIEGTTRKQA VVLNDRVKQV SGTLIIKDAV VEDSGKYLCV 180 181 VNNSVGGESV ETVLTVTAPL SAKIDPPTQT VDFGRPAVFT CQYTGNPIKT VSWMKDGKAI 240 241 GHSEPVLRIE SVKKEDKGMY QCFVRNDQES AEASAELKLG GRFDPPVIRQ AFQEETMEPG 300 301 PSVFLKCVAG GNPTPEISWE LDGKKIANND RYQVGQYVTV NGDVVSYLNI TSVHANDGGL 360 361 YKCIAKSKVG VAEHSAKLNV YGLPYIRQME KKAIVAGETL IVTCPVAGYP IDSIVWERDN 420 421 RALPINRKQK VFPNGTLIIE NVERNSDQAT YTCVAKNQEG YSARGSLEVQ VMVPPSIAPF 480 481 SFGDDPVNTG ENAGVQCMVQ KGDVPITIKW TLNSRPIING EEGITILKLS PKTSVLNIAA 540 541 VEQDHRGVFK CIAENKAGSS FTTSELKVNV PPRWILEPTD KAFAQGSDAK VECKADGFPK 600 601 PQVTWKKAVG DTPGEYKDLK KSDNIRVEEG TLHVDNIQKT NEGYYLCEAI NGIGSGLSAV 660 661 IMISVQ |
Detection Method: | |
Confidence: | 59.0 |
Match: | 1e07A |
Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [811-997] |
1 11 21 31 41 51 | | | | | | 1 APPEFTEKLR NQTARRGEPA VLQCEAKGEK PIGILWNMNN MRLDPKNDNR YTIREEILST 60 61 GVMSSLSIKR TERSDSALFT CVATNAFGSD DASINMIVQE VPEMPYALKV LDKSGRSVQL 120 121 SWAQPYDGNS PLDRYIIEFK RSRASWSEID RVIVPGHTTE AQVQKLSPAT TYNIRIVAEN 180 181 AIGTSQS |
Detection Method: | |
Confidence: | 36.69897 |
Match: | 2nziA |
Description: | No description for 2nziA was found. |
Region A: Residues: [998-1114] |
1 11 21 31 41 51 | | | | | | 1 SEAVTIITAE EAPSGKPQNI KVEPVNQTTM RVTWKPPPRT EWNGEILGYY VGYKLSNTNS 60 61 SYVFETINFI TEEGKEHNLE LQNLRVYTQY SVVIQAFNKI GAGPLSEEEK QFTAEGT |
Detection Method: | |
Confidence: | 22.69897 |
Match: | 1cfbA |
Description: | CRYSTAL STRUCTURE OF TANDEM TYPE III FIBRONECTIN DOMAINS FROM DROSOPHILA NEUROGLIAN AT 2.0 ANGSTROMS |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [1115-1702] |
1 11 21 31 41 51 | | | | | | 1 PSQPPSDTAC TTLTSQTIRV GWVSPPLESA NGVIKTYKVV YAPSDEWYDE TKRHYKKTAS 60 61 SDTVLHGLKK YTNYTMQVLA TTAGGDGVRS VPIHCQTEPD VPEAPTDVKA LVMGNAAILV 120 121 SWRPPAQPNG IITQYTVYSK AEGAETETKT QKVPHYQMSF EATELEKNKP YEFWVTASTT 180 181 IGEGQQSKSI VAMPSDQVPA KIASFDDTFT ATFKEDAKMP CLAVGAPQPE ITWKIKGVEF 240 241 SANDRMRVLP DGSLLIKSVN RQDAGDYSCH AENSIAKDSI THKLIVLAPP QSPHVTLSAT 300 301 TTDALTVKLK PHEGDTAPLH GYTLHYKPEF GEWETSEVSV DSQKHNIEGL LCGSRYQVYA 360 361 TGFNNIGAGE ASDILNTRTK GQKPKLPEKP RFIEVSSNSV SLHFKAWKDG GCPMSHFVVE 420 421 SKKRDQIEWN QISNNVKPDN NYVVLDLEPA TWYNLRITAH NSAGFTVAEY DFATLTVTGG 480 481 TIAPLDDGSG HGNVHTRIRL PAWMPEWLDL NFMVPLIATV VVVAVGICVV CVALSRRRAD 540 541 DMRGGQKDVY YDVVYNQTMG PGATLDKRRP DLRDELGYIA PPNRKLPP |
Detection Method: | |
Confidence: | 25.0 |
Match: | 2v5yA |
Description: | No description for 2v5yA was found. |
Region A: Residues: [1703-1839] |
1 11 21 31 41 51 | | | | | | 1 VPGSNYNTCD RIKRGRGGLR SNHSTWDPRR NPNLYEELKA PPVPMHGNHY GHAHGNAECH 60 61 YRHPGMEDEI CPYATFHLLG FREEMDPTKA MNFQTFPHQN GHAGPVPGHA GTMLPPGHPG 120 121 HVHSRSGSQS MPRANRY |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1840-2032] |
1 11 21 31 41 51 | | | | | | 1 QRKNSQGGQS SIYTPAPEYD DPANCAEEDQ YRRYTRVNSQ GGSLYSGPGP EYDDPANCAP 60 61 EEDQYGSQYG GPYGQPYDHY GSRGSMGRRS IGSARNPGNG SPEPPPPPPR NHDMSNSSFN 120 121 DSKESNEISE AECDRDHGPR GNYGAVKRSP QPKDQRTTEE MRKLIERNET GPKQLQLQQA 180 181 NGAGFTAYDT MAV |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.