| Protein: | sdt-PH |
| Organism: | Drosophila melanogaster |
| Length: | 934 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sdt-PH.
| Description | E-value | Query Range |
Subject Range |
|
|
599.0 | [0..76] | [934..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MRILKQWNRR RSGSSIVVLD GDDLKPCLPD DYISGQHHLN HQQQLQLQQQ LQQQHPLQQQ 60
61 HYRTHSGDIR EIDQEMLTML SVNQDNGPHR EMAVDCPDTF IARNKTPP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-332] |
1 11 21 31 41 51
| | | | | |
1 RYPPPRPPQL NGNAKPVPPP RDHLRVEKDG RLVNCSPAPQ LPDRRAPGNA SSGSSGATTH 60
61 PLQHQQIAQI VEPTLEQLDS IKKYQEQLRR RREEEERIAQ QNEFLRNSLR GSRKLKALQD 120
121 TATPGKAVAQ QQQQATLATQ VVGVENEAYL PDEDQPQAEQ IDGYGELIAA LTRLQNQLSK 180
181 SGLSTLAGRV SAAHSVLASA SVAHVLAART AVLQRRRSRV SGPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [333-383] |
1 11 21 31 41 51
| | | | | |
1 HHSSLGLQKD IVELLTQSNT AAAIELGNLL TSHEMEGLLL AHDRIANHTD G
|
| Detection Method: | |
| Confidence: | 1.52 |
| Match: | 1zl8B |
| Description: | NMR structure of L27 heterodimer from C. elegans Lin-7 and H. sapiens Lin-2 scaffold proteins |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [384-470] |
1 11 21 31 41 51
| | | | | |
1 TPSPTPTPTP AIGAATGSTL SSPVAGPKRN LGMVVPPPVV PPPLAQRGAM PLPRGESPPP 60
61 VPMPPLATMP MSMPVNLPMS ACFGTLN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [471-571] |
1 11 21 31 41 51
| | | | | |
1 DQNDNIRIIQ IEKSTEPLGA TVRNEGEAVV IGRIVRGGAA EKSGLLHEGD EILEVNGQEL 60
61 RGKTVNEVCA LLGAMQGTLT FLIVPAGSPP SVGVMGGTTG S
|
| Detection Method: | |
| Confidence: | 18.154902 |
| Match: | 1va8A |
| Description: | Solution structure of the PDZ domain of Pals1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.2595117613307 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 3.03529700765506 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.83180079733297 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.39826531242265 | bayes_pls_golite062009 |
| protein binding | 2.35875654816667 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.79696347300128 | bayes_pls_golite062009 |
| guanylate kinase activity | 1.70730560221787 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.69528181005421 | bayes_pls_golite062009 |
| signal transducer activity | 1.51162321843898 | bayes_pls_golite062009 |
| molecular transducer activity | 1.51162321843898 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.00130123171287 | bayes_pls_golite062009 |
| protein domain specific binding | 0.64214865642772 | bayes_pls_golite062009 |
| transcription regulator activity | 0.387065538161985 | bayes_pls_golite062009 |
| receptor binding | 0.359972518335054 | bayes_pls_golite062009 |
|
Region A: Residues: [572-934] |
1 11 21 31 41 51
| | | | | |
1 QLAGLGGAHR DTAVLHVRAH FDYDPEDDLY IPCRELGISF QKGDVLHVIS REDPNWWQAY 60
61 REGEEDQTLA GLIPSQSFQH QRETMKLAIA EEAGLARSRG KDGSGSKGAT LLCARKGRKK 120
121 KKKASSEAGY PLYATTAPDE TDPEEILTYE EVALYYPRAT HKRPIVLIGP PNIGRHELRQ 180
181 RLMADSERFS AAVPHTSRAR REGEVPGVDY HFITRQAFEA DILARRFVEH GEYEKAYYGT 240
241 SLEAIRTVVA SGKICVLNLH PQSLKLLRAS DLKPYVVLVA PPSLDKLRQK KLRNGEPFKE 300
301 EELKDIIATA RDMEARWGHL FDMIIINNDT ERAYHQLLAE INSLEREPQW VPAQWVHNNR 360
361 DES
|
| Detection Method: | |
| Confidence: | 56.0 |
| Match: | 1kjwA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
