| Protein: | gi|108862276 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108862276.
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..10] | [606..23] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MVYLHKSPFH HRGNTNISPS TTLSRSWVRP PQIRGLPCII LPPPRQSPRS AADAHMAAPS 60
61 GSGEAAPASS TYYDVYGP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-246] |
1 11 21 31 41 51
| | | | | |
1 DAKPDVVFKE ATSNSTLNLQ DVQGLVTWVI GDGMLPSWVF VKNKPLIPKV VLLYVPGLDA 60
61 ALYMSQSRHL SSLKEFCGNP KPVLASSCIP DERHTIDALL TCRVKRKRAL KTTDQSHESD 120
121 GQEKLSSLDD LKDIPFPIKY YTLSEKDLED NGYNFSLEGF VPTVSAPP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [247-427] |
1 11 21 31 41 51
| | | | | |
1 GSSPYAILAL DCEMCVTAAG FELTRVTLVD IKGEVVLDKL VKPANPITDY NTRFSGITAE 60
61 MLADVTTTLQ EIQEEFVGLV HKETVLVGHS LENDLMALRI SHDLIIDTAV LYKHNRGHRF 120
121 KIALRVLAKK FLNREIQNTG SGHDSVEDAK AALELALLKI KYGPDFGSPP STSRRKLASI 180
181 L
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1wljA |
| Description: | human ISG20 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nuclease activity | 2.65398446409354 | bayes_pls_golite062009 |
| ribonuclease activity | 2.17677493546761 | bayes_pls_golite062009 |
| endoribonuclease activity, producing 5'-phosphomonoesters | 1.74431545836806 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.70600098208524 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.65911933935463 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.59628511603826 | bayes_pls_golite062009 |
| exonuclease activity | 1.4327316829508 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 1.42069917818896 | bayes_pls_golite062009 |
| catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.19753926150484 | bayes_pls_golite062009 |
| 1.18236432793831 | bayes_pls_golite062009 | |
| transcription regulator activity | 1.10433412699603 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04079362397031 | bayes_pls_golite062009 |
| endonuclease activity | 0.991569665925888 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.86862629020506 | bayes_pls_golite062009 |
| DNA binding | 0.860359347662869 | bayes_pls_golite062009 |
| hydrolase activity | 0.768258293320302 | bayes_pls_golite062009 |
| binding | 0.762139256580538 | bayes_pls_golite062009 |
| RNA binding | 0.750194803368593 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.389326716045122 | bayes_pls_golite062009 |
| transcription factor activity | 0.332903382446869 | bayes_pls_golite062009 |
| endoribonuclease activity | 0.016619833072142 | bayes_pls_golite062009 |
|
Region A: Residues: [428-515] |
1 11 21 31 41 51
| | | | | |
1 HESGKKCSLI DDASVLERYS DASCNSIAVF SDDDALSRSM KEVKNDKVSF VWTQFSKLIS 60
61 YLRTRAQDPD KVKSCVAEAI ALQTCDRK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [516-607] |
1 11 21 31 41 51
| | | | | |
1 TAQKRKKHQT CPELKEILIG LDKKIRKLYS ILPDNAMLII CSGHGDTPLV QRLRKMLKQE 60
61 EETVESRESI VKALEDIQAQ AEVALCFCCV KH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
