| Protein: | gi|25535937, gi|... |
| Organism: | Homo sapiens |
| Length: | 1051 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25535937, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [11..1051] | [22..1062] |
|
|
0.0 | [11..1051] | [22..1062] |
|
|
0.0 | [11..1051] | [22..1059] |
|
|
0.0 | [11..1051] | [22..1085] |
|
|
0.0 | [12..1051] | [24..1104] |
|
|
0.0 | [11..1051] | [22..1085] |
|
Region A: Residues: [1-379] |
1 11 21 31 41 51
| | | | | |
1 CNHPLASLLS LEIRAQLVEQ QKCLEQQTEM RVQLLQDLQD FFRKKAEIET EYSRNLEKLA 60
61 ERFMAKTRST KDHQQYKKDQ NLLSPVNCWY LLLNQVRRES KDHATLSDIY LNNVIMRFMQ 120
121 ISEDSTRMFK KSKEIAFQLH EDLMKVLNEL YTVMKTYHMY HAESISAESK LKEAEKQEEK 180
181 QIGRSGDPVF HIRLEERHQR RSSVKKIEKM KEKRQAKYSE NKLKSIKARN EYLLTLEATN 240
241 ASVFKYYIHD LSDLIDCCDL GYHASLNRAL RTYLSAEYNL ETSRHEGLDI IENAVDNLEP 300
301 RSDKQRFMEM YPAAFCPPMK FEFQSHMGDE VCQVSAQQPV QAELMLRYQQ LQSRLATLKI 360
361 ENEEVKKTTE ATLQTIQDM
|
| Detection Method: |  |
| Confidence: | 19.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [380-663] |
1 11 21 31 41 51
| | | | | |
1 VTIEDYDVSE CFQHSRSTES VKSTVSETYL SKPSIAKRRA NQQETEQFYF MKLREYLEGS 60
61 NLITKLQAKH DLLQRTLGEG HRAEYMTTSR GRRNSHTRHQ DSGQVIPLIV ESCIRFINLY 120
121 GLQHQGIFRV SGSQVEVNDI KNSFERGENP LADDQSNHDI NSVAGVLKLY FRGLENPLFP 180
181 KERFNDLISC IRIDNLYERA LHIRKLLLTL PRSVLIVMRY LFAFLNHLSQ YSDENMMDPY 240
241 NLAICFGPTL MPVPEIQDQV SCQAHVNEII KTIIIHHETI FPDA
|
| Detection Method: | |
| Confidence: | 34.0 |
| Match: | 1xa6A |
| Description: | Crystal Structure of the Human Beta2-Chimaerin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| Rho GTPase activator activity | 4.58620967349979 | bayes_pls_golite062009 |
| Rac GTPase activator activity | 4.48279904625182 | bayes_pls_golite062009 |
| binding | 2.79128751898373 | bayes_pls_golite062009 |
| GTPase regulator activity | 2.70614727793157 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 2.68579854252375 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 2.06038764955701 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.9750017471254 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.95738547986197 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.39616729198212 | bayes_pls_golite062009 |
| Rho GTPase binding | 1.34980300847466 | bayes_pls_golite062009 |
| protein binding | 1.29100556128076 | bayes_pls_golite062009 |
| molecular transducer activity | 1.25507073225414 | bayes_pls_golite062009 |
| signal transducer activity | 1.25507073225414 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 1.09070479183477 | bayes_pls_golite062009 |
| transcription regulator activity | 1.08577758274384 | bayes_pls_golite062009 |
| Rho guanyl-nucleotide exchange factor activity | 0.967362611034944 | bayes_pls_golite062009 |
| Ras guanyl-nucleotide exchange factor activity | 0.958295643211986 | bayes_pls_golite062009 |
| tubulin binding | 0.81703797277662 | bayes_pls_golite062009 |
| GTPase activator activity | 0.717730683557543 | bayes_pls_golite062009 |
| nucleic acid binding | 0.480348726111787 | bayes_pls_golite062009 |
| motor activity | 0.45431702357543 | bayes_pls_golite062009 |
| receptor activity | 0.434186339265983 | bayes_pls_golite062009 |
| actin binding | 0.43218751822947 | bayes_pls_golite062009 |
| DNA binding | 0.418154636457321 | bayes_pls_golite062009 |
| enzyme activator activity | 0.298334474872045 | bayes_pls_golite062009 |
| microfilament motor activity | 0.0746966011130201 | bayes_pls_golite062009 |
| microtubule binding | 0.0655176038082335 | bayes_pls_golite062009 |
|
Region A: Residues: [664-905] |
1 11 21 31 41 51
| | | | | |
1 KELDGPVYEK CMAGDDYCDS PYSEHGTLEE VDQDAGTEPH TSEDECEPIE AIAKFDYVGR 60
61 SARELSFKKG ASLLLYHRAS EDWWEGRHNG IDGLVPHQYI VVQDMDDTFS DTLSQKADSE 120
121 ASSGPVTEDK SSSKDMNSPT DRHPDGYLAR QRKRGEPPPP VRRPGRTSDG HCPLHPPHAL 180
181 SNSSVDLGSP SLASHPRGLL QNRGLNNDSP ERRRRPGHGS LTNISRHDSL KKIDSPPIRR 240
241 ST
|
| Detection Method: | |
| Confidence: | 3.82 |
| Match: | 1ng2A |
| Description: | p47pox (neutrophil cytosolic factor 1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [906-1051] |
1 11 21 31 41 51
| | | | | |
1 SSGQYTGFND HKPLDPETIA QDIEETMNTA LNELRELERQ STAKHAPDVV LDTLEQVKNS 60
61 PTPATSTESL SPLHNVALRS SEPQIRRSTS SSSDTMSTFK PMVAPRMGVQ LKPPALRPKP 120
121 AVLPKTNPTI GPAPPPQGPT DKSCTM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
