| Protein: | HIST1H2BM |
| Organism: | Homo sapiens |
| Length: | 126 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIST1H2BM.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-55 | [1..126] | [107..232] |
|
|
8.0E-55 | [1..126] | [70..195] |
|
|
3.0E-54 | [1..126] | [1..126] |
|
|
4.0E-54 | [1..126] | [66..191] |
|
|
1.0E-53 | [1..121] | [1..121] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MPEPVKSAPV PKKGSKKAIN KAQKKDGKKR KRSRKESYSV YVYKVLKQVH PDTGISSKAM 60
61 GIMNSFVNDI FERIAGEASR LAHYNKRSTI TSREIQTAVR LLLPGELAKH AVSEGTKAVT 120
121 KYTSSK
|
| Detection Method: |  |
| Confidence: | 49.69897 |
| Match: | 2cv5D |
| Description: | Crystal structure of human nucleosome core particle |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 4.55755973084136 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.08569852262714 | bayes_pls_golite062009 |
| binding | 2.69789412293579 | bayes_pls_golite062009 |
| histone binding | 1.94956167709008 | bayes_pls_golite062009 |
| protein binding | 1.2861218811362 | bayes_pls_golite062009 |
| chromatin binding | 1.20812624406559 | bayes_pls_golite062009 |
| DNA binding | 1.12213200843227 | bayes_pls_golite062009 |
| nucleic acid binding | 1.11168501368799 | bayes_pls_golite062009 |
| centromeric DNA binding | 1.03586371237592 | bayes_pls_golite062009 |
| transcription factor binding | 0.88619366665208 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77271826645526 | bayes_pls_golite062009 |
| transcription initiation factor activity | 0.725138319268162 | bayes_pls_golite062009 |
| transcription regulator activity | 0.332480599938169 | bayes_pls_golite062009 |
| receptor binding | 0.037520339590055 | bayes_pls_golite062009 |
