| Protein: | LMAN1 |
| Organism: | Homo sapiens |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LMAN1.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..510] | [1..510] |
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0.0 | [1..510] | [1..510] |
|
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0.0 | [1..510] | [1..510] |
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0.0 | [1..510] | [1..510] |
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0.0 | [1..510] | [1..517] |
|
Region A: Residues: [1-279] |
1 11 21 31 41 51
| | | | | |
1 MAGSRQRGLR ARVRPLFCAL LLSLGRFVRG DGVGGDPAVA LPHRRFEYKY SFKGPHLVQS 60
61 DGTVPFWAHA GNAIPSSDQI RVAPSLKSQR GSVWTKTKAA FENWEVEVTF RVTGRGRIGA 120
121 DGLAIWYAEN QGLEGPVFGS ADLWNGVGIF FDSFDNDGKK NNPAIVIIGN NGQIHYDHQN 180
181 DGASQALASC QRDFRNKPYP VRAKITYYQN TLTVMINNGF TPDKNDYEFC AKVENMIIPA 240
241 QGHFGISAAT GGLADDHDVL SFLTFQLTEP GKEPPTPDK
|
| Detection Method: |  |
| Confidence: | 56.0 |
| Match: | 1r1zA |
| Description: | The Crystal structure of the Carbohydrate recognition domain of the glycoprotein sorting receptor p58/ERGIC-53 reveals a novel metal binding site and conformational changes associated with calcium ion binding |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.77315480906007 | bayes_pls_golite062009 |
| sugar binding | 1.53959484116223 | bayes_pls_golite062009 |
| carbohydrate binding | 1.40439904952516 | bayes_pls_golite062009 |
| transporter activity | 1.29150662073327 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07075219961504 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.801327928563072 | bayes_pls_golite062009 |
| protein binding | 0.657665757061848 | bayes_pls_golite062009 |
| signal transducer activity | 0.631926547812897 | bayes_pls_golite062009 |
| molecular transducer activity | 0.631926547812897 | bayes_pls_golite062009 |
| monosaccharide binding | 0.5678336426881 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.546870122670733 | bayes_pls_golite062009 |
| unfolded protein binding | 0.534220865159691 | bayes_pls_golite062009 |
| receptor activity | 0.23954333371021 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.00800219256384116 | bayes_pls_golite062009 |
|
Region A: Residues: [280-468] |
1 11 21 31 41 51
| | | | | |
1 EISEKEKEKY QEEFEHFQQE LDKKKEEFQK GHPDLQGQPA EEIFESVGDR ELRQVFEGQN 60
61 RIHLEIKQLN RQLDMILDEQ RRYVSSLTEE ISKRGAGMPG QHGQITQQEL DTVVKTQHEI 120
121 LRQVNEMKNS MSETVRLVSG MQHPGSAGGV YETTQHFIDI KEHLHIVKRD IDNLVQRNMP 180
181 SNEKPKCPE
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [469-510] |
1 11 21 31 41 51
| | | | | |
1 LPPFPSCLST VHFIIFVVVQ TVLFIGYIMY RSQQEAAAKK FF
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| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
