| Protein: | C10orf2 |
| Organism: | Homo sapiens |
| Length: | 684 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C10orf2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..684] | [1..684] |
|
|
0.0 | [1..683] | [1..684] |
|
|
0.0 | [1..684] | [1..683] |
|
|
0.0 | [1..684] | [1..684] |
|
|
0.0 | [1..640] | [1..639] |
|
|
0.0 | [1..576] | [1..576] |
|
|
4.0E-85 | [1..654] | [4..672] |
|
|
5.0E-72 | [40..426] | [5..434] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MWVLLRSGYP LRILLPLRGE WMGRRGLPRN LAPGPPRRRY RKETLQALDM PVLPVTATEI 60
61 RQYLRGHGIP FQDGHSCLRA LSPFAESSQL KGQTGVTTSF SLFIDKTTGH FLCMTSLAEG 120
121 SWEDFQASVE GRGDGAREGF LLSKAPEFED SEEVRRIWNR AIPLWELPDQ E
|
| Detection Method: |  |
| Confidence: | 50.69897 |
| Match: | 2au3A |
| Description: | Crystal Structure of the Aquifex aeolicus primase (Zinc Binding and RNA Polymerase Domains) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [172-684] |
1 11 21 31 41 51
| | | | | |
1 EVQLADTMFG LTKVTDDTLK RFSVRYLRPA RSLVFPWFSP GGSGLRGLKL LEAKCQGDGV 60
61 SYEETTIPRP SAYHNLFGLP LISRRDAEVV LTSRELDSLA LNQSTGLPTL TLPRGTTCLP 120
121 PALLPYLEQF RRIVFWLGDD LRSWEAAKLF ARKLNPKRCF LVRPGDQQPR PLEALNGGFN 180
181 LSRILRTALP AWHKSIVSFR QLREEVLGEL SNVEQAAGLR WSRFPDLNRI LKGHRKGELT 240
241 VFTGPTGSGK TTFISEYALD LCSQGVNTLW GSFEISNVRL ARVMLTQFAE GRLEDQLDKY 300
301 DHWADRFEDL PLYFMTFHGQ QSIRTVIDTM QHAVYVYDIC HVIIDNLQFM MGHEQLSTDR 360
361 IAAQDYIIGV FRKFATDNNC HVTLVIHPRK EDDDKELQTA SIFGSAKASQ EADNVLILQD 420
421 RKLVTGPGKR YLQVSKNRFD GDVGVFPLEF NKNSLTFSIP PKNKARLKKI KDDTGPVAKK 480
481 PSSGKKGATT QNSEICSGQA PTPDQPDTSK RSK
|
| Detection Method: | |
| Confidence: | 51.522879 |
| Match: | 1q57A |
| Description: | The Crystal Structure of the Bifunctional Primase-Helicase of Bacteriophage T7 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA primase activity | 5.58425508363583 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 3.06119235645036 | bayes_pls_golite062009 |
| RNA polymerase activity | 3.06119235645036 | bayes_pls_golite062009 |
| binding | 2.0681607836408 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.49611313354225 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| nucleic acid binding | 0.913322399315129 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.742401164348338 | bayes_pls_golite062009 |
| helicase activity | 0.701689608967233 | bayes_pls_golite062009 |
| protein binding | 0.378225828131122 | bayes_pls_golite062009 |
| DNA binding | 0.376487324624615 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 0.3625050107782 | bayes_pls_golite062009 |
| DNA helicase activity | 0.286798609263816 | bayes_pls_golite062009 |
| DNA clamp loader activity | 0.27925703205288 | bayes_pls_golite062009 |
| transcription regulator activity | 0.150159515184919 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.146865639513637 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.146865639513637 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| DNA polymerase activity | 4.95561462330096E-4 | bayes_pls_golite062009 |
