Protein: | OSBPL6 |
Organism: | Homo sapiens |
Length: | 934 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OSBPL6.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..934] | [1..934] |
|
0.0 | [1..934] | [1..928] |
|
0.0 | [1..934] | [1..934] |
|
0.0 | [1..934] | [8..966] |
|
0.0 | [1..934] | [1..959] |
Region A: Residues: [1-210] |
1 11 21 31 41 51 | | | | | | 1 MSSDEKGISP AHKTSTPTHR SASSSTSSQR DSRQSIHILE RTASSSTEPS VSRQLLEPEP 60 61 VPLSKEADSW EIIEGLKIGQ TNVQKPDKHE GFMLKKRKWP LKGWHKRFFV LDNGMLKYSK 120 121 APLDIQKGKV HGSIDVGLSV MSIKKKARRI DLDTEEHIYH LKVKSQDWFD AWVSKLRHHR 180 181 LYRQNEIVRS PRDASFHIFP STSTAESSPA |
Detection Method: | ![]() |
Confidence: | 16.39794 |
Match: | 1u5eA |
Description: | Crystal Structure of a N-terminal Fragment of SKAP-Hom Containing Both the Helical Dimerization Domain and the PH Domain |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 2.42470476396787 | bayes_pls_golite062009 |
protein binding | 2.1446140694885 | bayes_pls_golite062009 |
receptor binding | 0.3173431866346 | bayes_pls_golite062009 |
Region A: Residues: [211-415] |
1 11 21 31 41 51 | | | | | | 1 ANVSVMDGKM QPNSFPWQSP LPCSNSLPAT CTTGQSKVAA WLQDSEEMDR CAEDLAHCQS 60 61 NLVELSKLLQ NLEILQRTQS APNFTDMQAN CVDISKKDKR VTRRWRTKSV SKDTKIQLQV 120 121 PFSATMSPVR LHSSNPNLCA DIEFQTPPSH LTDPLESSTD YTKLQEEFCL IAQKVHSLLK 180 181 SAFNSIAIEK EKLKQMVSEQ DHSKG |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [416-557] |
1 11 21 31 41 51 | | | | | | 1 HSTQMARLRQ SLSQALNQNA ELRSRLNRIH SESIICDQVV SVNIIPSPDE AGEQIHVSLP 60 61 LSQQVANESR LSMSESVSEF FDAQEVLLSA SSSENEASDD ESYISDVSDN ISEDNTSVAD 120 121 NISRQILNGE LTGGAFRNGR RA |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [558-934] |
1 11 21 31 41 51 | | | | | | 1 CLPAPCPDTS NINLWNILRN NIGKDLSKVS MPVELNEPLN TLQHLCEEME YSELLDKASE 60 61 TDDPYERMVL VAAFAVSGYC STYFRAGSKP FNPVLGETYE CIREDKGFRF FSEQVSHHPP 120 121 ISACHCESKN FVFWQDIRWK NKFWGKSMEI LPVGTLNVML PKYGDYYVWN KVTTCIHNIL 180 181 SGRRWIEHYG EVTIRNTKSS VCICKLTFVK VNYWNSNMNE VQGVVIDQEG KAVYRLFGKW 240 241 HEGLYCGVAP SAKCIWRPGS MPTNYELYYG FTRFAIELNE LDPVLKDLLP PTDARFRPDQ 300 301 RFLEEGNLEA AASEKQRVEE LQRSRRRYME ENNLEHIPKF FKKVIDANQR EAWVSNDTYW 360 361 ELRKDPGFSK VDSPVLW |
Detection Method: | ![]() |
Confidence: | 80.69897 |
Match: | 1zhtA |
Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
oxysterol binding | 2.56824234952236 | bayes_pls_golite062009 |
steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
binding | 1.67154210149282 | bayes_pls_golite062009 |
lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
0.35288515581255 | bayes_pls_golite062009 | |
phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |