| Protein: | OSBPL6 |
| Organism: | Homo sapiens |
| Length: | 934 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OSBPL6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..934] | [1..934] |
|
|
0.0 | [1..934] | [1..928] |
|
|
0.0 | [1..934] | [1..934] |
|
|
0.0 | [1..934] | [8..966] |
|
|
0.0 | [1..934] | [1..959] |
|
Region A: Residues: [1-210] |
1 11 21 31 41 51
| | | | | |
1 MSSDEKGISP AHKTSTPTHR SASSSTSSQR DSRQSIHILE RTASSSTEPS VSRQLLEPEP 60
61 VPLSKEADSW EIIEGLKIGQ TNVQKPDKHE GFMLKKRKWP LKGWHKRFFV LDNGMLKYSK 120
121 APLDIQKGKV HGSIDVGLSV MSIKKKARRI DLDTEEHIYH LKVKSQDWFD AWVSKLRHHR 180
181 LYRQNEIVRS PRDASFHIFP STSTAESSPA
|
| Detection Method: |  |
| Confidence: | 16.39794 |
| Match: | 1u5eA |
| Description: | Crystal Structure of a N-terminal Fragment of SKAP-Hom Containing Both the Helical Dimerization Domain and the PH Domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.42470476396787 | bayes_pls_golite062009 |
| protein binding | 2.1446140694885 | bayes_pls_golite062009 |
| receptor binding | 0.3173431866346 | bayes_pls_golite062009 |
|
Region A: Residues: [211-415] |
1 11 21 31 41 51
| | | | | |
1 ANVSVMDGKM QPNSFPWQSP LPCSNSLPAT CTTGQSKVAA WLQDSEEMDR CAEDLAHCQS 60
61 NLVELSKLLQ NLEILQRTQS APNFTDMQAN CVDISKKDKR VTRRWRTKSV SKDTKIQLQV 120
121 PFSATMSPVR LHSSNPNLCA DIEFQTPPSH LTDPLESSTD YTKLQEEFCL IAQKVHSLLK 180
181 SAFNSIAIEK EKLKQMVSEQ DHSKG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [416-557] |
1 11 21 31 41 51
| | | | | |
1 HSTQMARLRQ SLSQALNQNA ELRSRLNRIH SESIICDQVV SVNIIPSPDE AGEQIHVSLP 60
61 LSQQVANESR LSMSESVSEF FDAQEVLLSA SSSENEASDD ESYISDVSDN ISEDNTSVAD 120
121 NISRQILNGE LTGGAFRNGR RA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.307 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.227 | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.206 | a.3.1 | Cytochrome c |
|
Region A: Residues: [558-934] |
1 11 21 31 41 51
| | | | | |
1 CLPAPCPDTS NINLWNILRN NIGKDLSKVS MPVELNEPLN TLQHLCEEME YSELLDKASE 60
61 TDDPYERMVL VAAFAVSGYC STYFRAGSKP FNPVLGETYE CIREDKGFRF FSEQVSHHPP 120
121 ISACHCESKN FVFWQDIRWK NKFWGKSMEI LPVGTLNVML PKYGDYYVWN KVTTCIHNIL 180
181 SGRRWIEHYG EVTIRNTKSS VCICKLTFVK VNYWNSNMNE VQGVVIDQEG KAVYRLFGKW 240
241 HEGLYCGVAP SAKCIWRPGS MPTNYELYYG FTRFAIELNE LDPVLKDLLP PTDARFRPDQ 300
301 RFLEEGNLEA AASEKQRVEE LQRSRRRYME ENNLEHIPKF FKKVIDANQR EAWVSNDTYW 360
361 ELRKDPGFSK VDSPVLW
|
| Detection Method: | |
| Confidence: | 80.69897 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
| oxysterol binding | 2.56824234952236 | bayes_pls_golite062009 |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| binding | 1.67154210149282 | bayes_pls_golite062009 |
| lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
| 0.35288515581255 | bayes_pls_golite062009 | |
| phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |
