| Protein: | SPO22 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 975 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO22.
| Description | E-value | Query Range |
Subject Range |
|
|
836.0 | [0..74] | [955..75] |
|
Region A: Residues: [1-220] |
1 11 21 31 41 51
| | | | | |
1 MSDHNVNSTF RKTLVELCET ATWITSQVYA AKNLEKNDLI TVDNKISALY PIAEKYDRSF 60
61 RTTTVILDEE LILKLENAAS SLWNSLTIAM KAEKASDKYF NEVFCKCKIF ATKLLSIHEA 120
121 LFRTNTNLLR NFKCYISSFK SASEYRFDDL ITNTQQHSEK YLQIINENVE SFSNEEKTEF 180
181 KKLTFEFYLV NFQLYLSEND LDTANIYTAK VNITDNSKYM
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [221-603] |
1 11 21 31 41 51
| | | | | |
1 DADLLIELCR MIYNSTVMLK EINNPETQLV DVNIISFLKD VEKYLELPVE NLKSHTDYSN 60
61 LKYSVLIFMA NCLVEGHPQA SELEQCDHYL SLLQNEYPNK VDPFILAINL TKRRNIVNPA 120
121 ETIEEILMRM IMSVDVISNF QAVIASINDL SKMNTKFSIV CLDYLLINKL NSKNDSKFLG 180
181 KAICSRFLIT TQSKTMNDSE IAESLENFST QMERIVSEPL TKHAISCIIT LLWNTGKKLE 240
241 KMEKYVVSIR FYKLALKDII SQNYSDRGKI QRALQVVYNK IEDYSNTVRV YQDMDEVDRQ 300
301 SPLCQLLMLQ SFLADDKTEE ALTCLQKIKS SEDEKSTDAL ILAVAECKRK TDLSVQGLLM 360
361 IFDKLQSKSN SQTISSTSSS QTL
|
| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.57186536498101 | bayes_pls_golite062009 |
| protein binding | 1.83529176977066 | bayes_pls_golite062009 |
| transcription factor binding | 0.350910388473439 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.1539868026804 | bayes_pls_golite062009 |
|
Region A: Residues: [604-815] |
1 11 21 31 41 51
| | | | | |
1 SILRYTLQMI VKVSEEEPLE TFINYLPTVQ KLLQKAVEFL KTVKLLNQLP PDVEKEAIYQ 60
61 QSVAVNEIEW FASFSYNVAV KCLVDQSCES ISEFPQYCIQ FIDLIPVQDF TFPKMYHFTY 120
121 WRFKATILQL IIAKEKAKQD QHQKDWDIYE KSEELVNSIN VMKKSSEFKD GSSLEDRNTL 180
181 HECFLEALTI HLESALMMPD QTRILDILKK TE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [816-975] |
1 11 21 31 41 51
| | | | | |
1 LYQDSRVDAL LIDISSNMED LPKGVLIEIL ETVLKRNMGP EVKERELCSW LRILLENAIN 60
61 LNHEVELRIL DRVLKILNIN QSSLQDTDGV LQTELETIAT YCWNIGVNYI IKDNKSNGIV 120
121 WCKHSMGFAN MVNEGLQEQL YSLWESLASS ANIDINSIAK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
