| Protein: | YCG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1035 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCG1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1035] | [17..1051] |
|
|
0.0 | [16..1003] | [9..988] |
|
|
0.0 | [5..985] | [15..988] |
|
|
0.0 | [16..990] | [9..1001] |
|
|
0.0 | [4..963] | [27..1004] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MQDPDGIDIN TKIFNSVAEV FQKAQGSYAG HRKHIAVLKK IQSKAVEQGY EDAFNFWFDK 60
61 LVTKILPLK
|
| Detection Method: |  |
| Confidence: | 22.69897 |
| Match: | 1gw5B_ |
| Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [70-716] |
1 11 21 31 41 51
| | | | | |
1 KNEIIGDRIV KLVAAFIASL ERELILAKKQ NYKLTNDEEG IFSRFVDQFI RHVLRGVESP 60
61 DKNVRFRVLQ LLAVIMDNIG EIDESLFNLL ILSLNKRIYD REPTVRIQAV FCLTKFQDEE 120
121 QTEHLTELSD NEENFEATRT LVASIQNDPS AEVRRAAMLN LINDNNTRPY ILERARDVNI 180
181 VNRRLVYSRI LKSMGRKCFD DIEPHIFDQL IEWGLEDREL SVRNACKRLI AHDWLNALDG 240
241 DLIELLEKLD VSRSSVCVKA IEALFQSRPD ILSKIKFPES IWKDFTVEIA FLFRAIYLYC 300
301 LDNNITEMLE ENFPEASKLS EHLNHYILLR YHHNDISNDS QSHFDYNTLE FIIEQLSIAA 360
361 ERYDYSDEVG RRSMLTVVRN MLALTTLSEP LIKIGIRVMK SLSINEKDFV TMAIEIINDI 420
421 RDDDIEKQEQ EEKIKSKKIN RRNETSVDEE DENGTHNDEV NEDEEDDNIS SFHSAVENLV 480
481 QGNGNVSESD IINNLPPEKE ASSATIVLCL TRSSYMLELV NTPLTENILI ASLMDTLITP 540
541 AVRNTAPNIR ELGVKNLGLC CLLDVKLAID NMYILGMCVS KGNASLKYIA LQVIVDIFSV 600
601 HGNTVVDGEG KVDSISLHKI FYKVLKNNGL PECQVIAAEG LCKLFLA
|
| Detection Method: | |
| Confidence: | 23.154902 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [717-793] |
1 11 21 31 41 51
| | | | | |
1 DVFTDDDLFE TLVLSYFSPI NSSNEALVQA FAFCIPVYCF SHPAHQQRMS RTAADILLRL 60
61 CVLWDDLQSS VIPEVDR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [794-1035] |
1 11 21 31 41 51
| | | | | |
1 EAMLKPNIIF QQLLFWTDPR NLVNQTGSTK KDTVQLTFLI DVLKIYAQIE KKEIKKMIIT 60
61 NINAIFLSSE QDYSTLKELL EYSDDIAEND NLDNVSKNAL DKLRNNLNSL IEEINERSET 120
121 QTKDENNTAN DQYSSILGNS FNKSSNDTIE HAADITDGNN TELTKTTVNI SAVDNTTEQS 180
181 NSRKRTRSEA EQIDTSKNLE NMSIQDTSTV AKNVSFVLPD EKSDAMSIDE EDKDSESFSE 240
241 VC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
