Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR196W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..470] | [1..470] |
|
|
0.0 | [1..470] | [1..470] |
|
Region A: Residues: [1-56] |
1 11 21 31 41 51
| | | | | |
1 MSIVRQSCDC CRVRRVKCDR NRPCDRCRQR NLRCTYLQPL RKRGPKSIGE SNLERA
|
| Detection Method: |  |
| Confidence: | 43.144602 |
| Match: | 1d66A_ |
| Description: | Gal4; CD2-Gal4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.03201524223606 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.87955444697212 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.86200506906385 | bayes_pls_golite062009 |
| transcription activator activity | 0.915626626047549 | bayes_pls_golite062009 |
|
Region A: Residues: [57-290] |
1 11 21 31 41 51
| | | | | |
1 AEIQMVTVNN NIMAAPVMYK KVPKKVIDQC LRLYHDQLYV IWPMLSYDDL YKLLEENYED 60
61 CSTYWFLVSL SAATLSDLHT KIEYKKGFFF AGEQLCNLCM SSRRFFDDLS NSDIFRIMTY 120
121 YCLHRCYAQF ADTRTSYRLS CEAIGLIKIA GFHREETYEF LPFGEQQLIR KVYYLLLMTE 180
181 RYYAVYIKCV TSLDTTISPP QPEIVTDSRL SLDSFLEVIK VFTVPGKYFY DALA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [291-470] |
1 11 21 31 41 51
| | | | | |
1 TNSVNGSYTE DSLKRIWNEL HISSLDIEPY SYGYIDYLFS RHWVRTLAWK LVLNKKDMRM 60
61 NFFSNTNATH IPVEIAKDML QDTLLTPIDL YDVHGPVIPM KALEIANALV DVVSKYDHNM 120
121 KLEAWNILCD VSKFVFSLKH CNHKMFQRFS TKCQSALIDL PISRPLRLND DSKDEVDIIP 180
181
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [282-470] |
1 11 21 31 41 51
| | | | | |
1 GKYFYDALAT NSVNGSYTED SLKRIWNELH ISSLDIEPYS YGYIDYLFSR HWVRTLAWKL 60
61 VLNKKDMRMN FFSNTNATHI PVEIAKDMLQ DTLLTPIDLY DVHGPVIPMK ALEIANALVD 120
121 VVSKYDHNMK LEAWNILCDV SKFVFSLKHC NHKMFQRFST KCQSALIDLP ISRPLRLNDD 180
181 SKDEVDIIP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
