| Protein: | JIP5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 514 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JIP5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..509] | [1038..1488] |
|
|
0.0 | [25..510] | [818..1255] |
|
Region A: Residues: [1-380] |
1 11 21 31 41 51
| | | | | |
1 MASSPQLEEE AAGKLETIHA SAMAKSKKKT DVVDSTNLPI LELLSLKAPI FQSLLHPELP 60
61 IIITGFGTGH IVCHRYDPAK LQSHLDRRRR IDTATTGKDA KKGVCPWIRL DIDLETGDLK 120
121 FVDIEEQQQQ KQTGKDEDLG VKTLWKTKRH KGSVRAMCFD SKGDNIFSVG SDNVLKKANT 180
181 MTGKVVKKVN LSSLFNSEEK KNDKFTKLCA SQTHPFILIG DESGNIHVIN SENLALSNSI 240
241 RSIHFGDSIN DIFHFDKRSA YKFISLGQTT LAYFDVRDKD AKPNVAGNED GKILISDDQE 300
301 DEVLCGCFVD PEVADTLLCG MGEGIVTVWK PNKNDLEDQM SRIKISKDES IDCIVPTLQD 360
361 DNCVWCGCSN GNIYKVNAKL
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1k8kC_ |
| Description: | Arp2/3 complex 41 kDa subunit ARPC1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [381-514] |
1 11 21 31 41 51
| | | | | |
1 GKVVEIRNHS ELDEVSFVDL DFEYRVVSGG LENIKIWELS SDDVEENASV ESDSDEPLSH 60
61 SDEDLSDDTS SDDETTLVGL SKEELLDELD KDLKEDHQEE KESNSKSVKK RKIMKENNKK 120
121 KDLYEHGIKK FDDL
|
| Detection Method: | |
| Confidence: | 76.69897 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
