| Protein: | AXL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1208 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AXL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1208] | [1..1208] |
|
|
0.0 | [14..1092] | [15..936] |
|
|
0.0 | [14..1092] | [17..961] |
|
|
0.0 | [4..1087] | [21..947] |
|
|
0.0 | [14..1092] | [14..935] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MSLREVTNYE VSFYIPLSYS NRTHKVCKLP NGILALIISD PTDTSSSCSL TVCTGSHNDP 60
61 KDIAGLAHLC EHMILSAGSK KYPDPGLFHT LIAKNNGSQN AFTTGEQTTF YFELPNTQNN 120
121 GEFTFESILD VFASFFKEPL FNPLLISKEI YAIQSEHEGN I
|
|
Region B: Residues: [180-260] |
1 11 21 31 41 51
| | | | | |
1 HPFSRFSTGN IHSLSSIPQL KKIKLKSSLN TYFENNFFGE NITLCIRGPQ SVNILTKLAL 60
61 SKFGDIKPKS AVKERSISIR T
|
|
Region C: Residues: [441-471] |
1 11 21 31 41 51
| | | | | |
1 QSSEDLPMEE CSKLSGILQD DLECLTPPNI F
|
| Detection Method: |  |
| Confidence: | 128.9794 |
| Match: | 1hr6B_ |
| Description: | Mitochondrial processing peptidase (MPP) beta chain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [162-179] |
1 11 21 31 41 51
| | | | | |
1 SSTTKIFYHA ARILANPD
|
|
Region B: Residues: [261-440] |
1 11 21 31 41 51
| | | | | |
1 RSFRRSKSLK KRQDSSKNDY SDLKTFKILN TTWEKKYKNT MCFQQFPECN SIFINSNKVP 60
61 IMRLLFPVSD KNTRFTKDDI KIYSHLWCEL FGDESPGSLS YYLASKGWLT GCFAFTSEFA 120
121 IGDIGLILEL ELTNSGWENI KRITTIVLNR LLPSFYVMNI DYLITFLKEQ NLIDLVSFLY 180
181
|
| Detection Method: | |
| Confidence: | 128.9794 |
| Match: | 1hr6B_ |
| Description: | Mitochondrial processing peptidase (MPP) beta chain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [472-568] |
1 11 21 31 41 51
| | | | | |
1 KGFKSLIEID DPNIEKYENT KANIQWWTGQ AIKFQNFLKS FMNHDNMRLL LLGNIKSGNI 60
61 FDKMKNKSDI CTDFFYEFEY YTANVHLASD NKFHSNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [569-1011] |
1 11 21 31 41 51
| | | | | |
1 SYEFNFPTGN LFLPDCVSDP LKLQQLFLEC SLKSKFATLR PQIYSEPTRT KPQLVSENQN 60
61 YEMWILKEDP NFASDNKSVV SFEVLGLGIK PSPEATIHLE VLAQALFIIT SSFLYPALRI 120
121 GYTYEIASSS KGNVTLRFTI SGFPEGVFTI VKTFVDTLKL IATDPTFLSK DTLRKARILV 180
181 RNKYKNASSD NCVKLASVGL LIVLEKYIWT LEDRINALEL TELESFEKFC FLFWRNPKHL 240
241 VLFMQGSLEY ADAINRYLNN NFTQHLKISN EGSKPTIRLY PPPSTKDLDQ GTNAFISYNG 300
301 HQDDPNNSIV YFIQTAQRDD IKNLTLTFLT EYLFSLTLVP DLRNKKQIGY IVLGGLRVLT 360
361 DTVGIHITVM SGSSGHNLET RINEYLSYLQ LQVLNRFTEF DFRRILLEPF LNLLKQNSTK 420
421 QFEGSAGPVD LLNEIVANVQ NGD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1012-1121] |
1 11 21 31 41 51
| | | | | |
1 NYTLNNKQMR QHRKVRNKIA EGRLNFQEDH EMIDISFLQK LTLKKYLAFF ESKISIYSAQ 60
61 RSKLSIMITS PMAEKEIASR KMFLQLEAFL KINGFAIKNE DLKKIVEHSK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1122-1208] |
1 11 21 31 41 51
| | | | | |
1 GNPILLVKNL FTYFRRRNEV FKLGTVVLQE ILKIIGMNLK QRYGSILGFS SQDGEGQEIE 60
61 KFWNNDTSPI VPLQELPEPN FFRKAAF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
