| Protein: | ASR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 310 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASR1.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-48 | [7..305] | [6..272] |
|
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1.0E-47 | [11..305] | [8..272] |
|
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1.0E-47 | [11..305] | [56..320] |
|
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2.0E-40 | [7..305] | [3..269] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MQGVEPRERP YPQPNIQISY KKMEECPICL ADDQEGEQFG CLNVCGHKFH LNCIREWHKY 60
61 SINLKCPICR VESTHLEVGE GQHALSINLK MGFMIKNAID YVGAETTNER N
|
| Detection Method: |  |
| Confidence: | 4.69897 |
| Match: | 1jm7A_ |
| Description: | brca1 RING domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [112-170] |
1 11 21 31 41 51
| | | | | |
1 EDDTGEQDQE IEFLSERLRG TLVMDTIKII QCSICGDTDV SRLSLYCQDC EAIYHETCL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.424 | d.10.1 | DNA-binding domain |
| View | Download | 0.363 | a.4.1 | Homeodomain-like |
| View | Download | 0.345 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.320 | d.48.1 | RecA protein, C-terminal domain |
| View | Download | 0.308 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.307 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.305 | d.58.17 | Metal-binding domain |
| View | Download | 0.281 | a.5.2 | UBA-like |
| View | Download | 0.256 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.253 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.248 | a.4.1 | Homeodomain-like |
| View | Download | 0.246 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.241 | d.58.49 | YajQ-like |
| View | Download | 0.241 | a.17.1 | p8-MTCP1 |
| View | Download | 0.238 | a.4.1 | Homeodomain-like |
| View | Download | 0.230 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.214 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.209 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.208 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.206 | a.64.1 | Saposin |
| View | Download | 0.204 | a.5.2 | UBA-like |
|
Region A: Residues: [171-310] |
1 11 21 31 41 51
| | | | | |
1 RGLACEVGDR NTWQECTDCR SNALLELRMG AISSQLASYD SRNSMIFAGE LRDKHSVKTQ 60
61 QMYEQIRNAK HKIQMHVRRA LDRYPLPLLR FKDAYKHVNK QVSRKLYRLS DNKYLPDQYD 120
121 YDSLARTGVH TELLIYCHDE
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.892 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.868 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.856 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.726 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.655 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.642 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.614 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.610 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.577 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.560 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.506 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.504 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.499 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.455 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.436 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.419 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.417 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.409 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.405 | N/A | N/A | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.393 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.381 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.380 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.371 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.369 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.368 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.365 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.365 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.361 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.360 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.353 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.345 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.343 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.339 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.321 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.306 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.303 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.297 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.296 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.294 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.292 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.291 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.288 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.288 | N/A | N/A | a.115.1 | A virus capsid protein alpha-helical domain |
| View | Download | 0.287 | N/A | N/A | d.20.1 | UBC-like |
| View | Download | 0.287 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.281 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.279 | N/A | N/A | a.48.2 | Transferrin receptor ectodomain, C-terminal domain |
| View | Download | 0.279 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.275 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.269 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.268 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.263 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.262 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.260 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.254 | N/A | N/A | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.253 | N/A | N/A | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.250 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.245 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.241 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.240 | N/A | N/A | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.238 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.236 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.235 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.235 | N/A | N/A | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.234 | N/A | N/A | d.58.35 | Pseudouridine synthase |
| View | Download | 0.233 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.230 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.226 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.225 | N/A | N/A | a.47.1 | STAT |
| View | Download | 0.221 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.219 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.218 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.210 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.209 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.208 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.206 | N/A | N/A | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.206 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.202 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
