| Protein: | SPE3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 293 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPE3.
| Description | E-value | Query Range |
Subject Range |
|
|
8.0E-88 | [4..293] | [10..299] |
|
|
3.0E-87 | [8..292] | [41..329] |
|
|
5.0E-87 | [7..293] | [13..299] |
|
|
7.0E-87 | [7..293] | [13..299] |
|
|
2.0E-86 | [8..292] | [48..337] |
|
|
4.0E-86 | [4..292] | [3..290] |
|
|
6.0E-86 | [6..293] | [44..331] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MAQEITHPTI VDGWFREISD TMWPGQAMTL KVEKVLHHEK SKYQDVLIFK STTYGNVLVL 60
61 DNVIQ
|
| Detection Method: |  |
| Confidence: | 589.39794 |
| Match: | 1inlA_ |
| Description: | Spermidine synthase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| spermidine synthase activity | 2.31131562815571 | bayes_pls_golite062009 |
| transferase activity | 1.77671966857605 | bayes_pls_golite062009 |
| transcription regulator activity | 1.61435611638306 | bayes_pls_golite062009 |
| DNA binding | 1.53375495589674 | bayes_pls_golite062009 |
| nucleic acid binding | 1.31440474302645 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| binding | 0.976078016260105 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.837368219068434 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.69697643153076 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.644010137949015 | bayes_pls_golite062009 |
| methyltransferase activity | 0.635463629299812 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.57386401278889 | bayes_pls_golite062009 |
|
Region A: Residues: [66-293] |
1 11 21 31 41 51
| | | | | |
1 ATERDEFAYQ EMIAHLALNS HPNPKKVLVI GGGDGGVLRE VVKHDSVEEA WLCDIDEAVI 60
61 RLSKEYLPEM AASYSHPKVK THIGDGFQFL RDYQNTFDVI ITDSSDPEGP AETLFQKEYF 120
121 QLLNSALTEK GVITTQAESM WIHLPIIKDL KKACSEVFPV AEYSFVTIPT YPTGTIGFMV 180
181 CSKDKTCNVK KPLREISDEK EAELYRYYNK KIHEASFVLP TWAAKELN
|
| Detection Method: | |
| Confidence: | 589.39794 |
| Match: | 1inlA_ |
| Description: | Spermidine synthase |
| Matching Structure (courtesy of the PDB): |
|
