| Protein: | EAF3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 401 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EAF3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..390] | [6..361] |
|
|
0.0 | [3..390] | [6..361] |
|
|
0.0 | [1..401] | [1..401] |
|
|
0.0 | [3..390] | [6..322] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MVDLEQEFAL GGRCLAFHGP LMYEAKILKI WDPSSKMYTS IPNDKPGGSS QATKEIKPQK 60
61 LGEDESIPEE IINGKCFFIH YQGWKSSWDE WVGY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transcription repressor activity | 4.08500855631983 | bayes_pls_golite062009 |
| chromatin binding | 3.84065302930105 | bayes_pls_golite062009 |
| transcription regulator activity | 3.64390820819794 | bayes_pls_golite062009 |
| methylated histone residue binding | 3.42338304360938 | bayes_pls_golite062009 |
| binding | 3.06758476214113 | bayes_pls_golite062009 |
| nucleic acid binding | 2.19167058827256 | bayes_pls_golite062009 |
| DNA binding | 2.05514577638135 | bayes_pls_golite062009 |
| histone binding | 2.00388175060339 | bayes_pls_golite062009 |
| protein binding | 1.61683263008775 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.998957812785999 | bayes_pls_golite062009 |
| general transcriptional repressor activity | 0.75184432495983 | bayes_pls_golite062009 |
| DNA helicase activity | 0.726970683178132 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.494788451379878 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.294457188332415 | bayes_pls_golite062009 |
| catalytic activity | 0.14067200158938 | bayes_pls_golite062009 |
| transcription activator activity | 0.136090220479238 | bayes_pls_golite062009 |
|
Region A: Residues: [95-401] |
1 11 21 31 41 51
| | | | | |
1 DRIRAYNEEN IAMKKRLANE AKEAKKSLLE QQKKKKLSTS LGGPSNGGKR KGDSRSNASI 60
61 SKSTSQSFLT SSVSGRKSGR SSANSLHPGS SLRSSSDQNG NDDRRRSSSL SPNMLHHIAG 120
121 YPTPKISLQI PIKLKSVLVD DWEYVTKDKK ICRLPADVTV EMVLNKYEHE VSQELESPGS 180
181 QSQLSEYCAG LKLYFDKCLG NMLLYRLERL QYDELLKKSS KDQKPLVPIR IYGAIHLLRL 240
241 ISVLPELISS TTMDLQSCQL LIKQTEDFLV WLLMHVDEYF NDKDPNRSDD ALYVNTSSQY 300
301 EGVALGM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
