| Protein: | AGC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 902 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGC1.
| Description | E-value | Query Range |
Subject Range |
|
|
575.0 | [0..1] | [822..1] |
|
|
544.0 | [0..1] | [823..1] |
|
|
527.0 | [0..1] | [836..1] |
|
|
477.0 | [0..43] | [801..29] |
|
|
460.0 | [0..43] | [736..29] |
|
|
457.0 | [0..42] | [732..29] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MEQINSNSRK KKQQLEVFKY FASVLTKEDK PISISNGMLD MPTVNSSKLT AGNGKPDTEK 60
61 LTGELILTYD DFIELISSSK TIYSKFTDHS FNLNQIPKNV FGCIFFAIDE QNKGYLTLND 120
121 WFYFNNLLEY DNYHLIILYE FFRKFDVENL KAKQKKELGS SSFNLKAADD
|
| Detection Method: |  |
| Confidence: | 2.81 |
| Match: | 1nyaA |
| Description: | NMR SOLUTION STRUCTURE OF CALERYTHRIN, AN EF-HAND CALCIUM-BINDING PROTEIN |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [171-348] |
1 11 21 31 41 51
| | | | | |
1 RIKSINYGNR FLSFDDLLLN LNQFKDTIRL LHESIDDNFV KDNKLLLDWN DFRFLKFYKC 60
61 YHENEEYLSL NSLVTILQND LKNEKIFIGF DRLAQMDSQG HRLALSKNQL TYLLRLFYSH 120
121 RVSADIFSSL NLSNTELLKA DNNSIPYNVF KDIFYLFQNF DLLNQIFHKY VTENNLNE
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1vrkA |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [349-521] |
1 11 21 31 41 51
| | | | | |
1 QDIREQIVTK NDFMTVLNAQ YNKVNNIIEF SPSQINLLFS IVANSKENRR LRKRNQDRDD 60
61 ELLNDHHYDS DIDFFIHNEY LHGVSRSRKN LESFNDYYHD LSDGFDQDSG VKKASKASTG 120
121 LFESVFGGKK DKATMRSDLT IEDFMKILNP NYLNDLVHQM ELQKNQNESL YIN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [522-818] |
1 11 21 31 41 51
| | | | | |
1 YYFYPIFDSL YNFSLGSIAG CIGATVVYPI DFIKTRMQAQ RSLAQYKNSI DCLLKIISRE 60
61 GIKGLYSGLG PQLIGVAPEK AIKLTVNDFM RNRLTDKNGK LSLFPEIISG ASAGACQVIF 120
121 TNPLEIVKIR LQVQSDYVGE NIQQANETAT QIVKKLGLRG LYNGVAACLM RDVPFSAIYF 180
181 PTYAHLKKDL FDFDPNDKTK RNRLKTWELL TAGAIAGMPA AFLTTPFDVI KTRLQIDPRK 240
241 GETKYNGIFH AIRTILKEES FRSFFKGGGA RVLRSSPQFG FTLAAYELFK GFIPSPD
|
| Detection Method: | |
| Confidence: | 108.0 |
| Match: | 1okcA |
| Description: | structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [819-902] |
1 11 21 31 41 51
| | | | | |
1 NKLKSREGRK RFCIDDDAGN EETVVHSNGE LPQQKFYSDD RKHANYYYKS CQIAKTFIDL 60
61 DNNFSRFDSS VYKNFQEHLR SING
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
