| Protein: | SUT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 268 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUT2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..268] | [1..268] |
|
Region A: Residues: [1-268] |
1 11 21 31 41 51
| | | | | |
1 MKPNNRTCDV ITNKDESLPA LLLPALNSYT CDDSLLKGQI SSNGRYQPFG FSDCSLLPKR 60
61 LNIQAGQGSM PVSSIQCADH SYSNWQKESE KTKLPKLGCP TEYTEYYKTV SSGETTDSAV 120
121 VSSIATNRLK RKRQRDGPSC DSCRIKKIKC NATIIIFLQD RNLISSISSN LHYTLSQDDI 180
181 NQFRMKFFRK LPDVMGTYEV IKHLDKIVLF KACTSCSRRN QKNGKCLFSR GFTKSDMNVF 240
241 PKINSKLKDK SIFEMTVDDY VAAGFQTL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [117-268] |
1 11 21 31 41 51
| | | | | |
1 DSAVVSSIAT NRLKRKRQRD GPSCDSCRIK KIKCNATIII FLQDRNLISS ISSNLHYTLS 60
61 QDDINQFRMK FFRKLPDVMG TYEVIKHLDK IVLFKACTSC SRRNQKNGKC LFSRGFTKSD 120
121 MNVFPKINSK LKDKSIFEMT VDDYVAAGFQ TL
|
| Detection Method: | |
| Confidence: | 2.8 |
| Match: | 1pyiA |
| Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.34861813464065 | bayes_pls_golite062009 |
| DNA binding | 4.03985756894684 | bayes_pls_golite062009 |
| nucleic acid binding | 3.97978190843512 | bayes_pls_golite062009 |
| transcription factor activity | 2.87348461329489 | bayes_pls_golite062009 |
| binding | 2.82809978070212 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.70904317608141 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 2.08956709478484 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.67344049333457 | bayes_pls_golite062009 |
| transcription activator activity | 0.822069987038721 | bayes_pls_golite062009 |
