| Protein: | SAM3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 587 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAM3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..587] | [1..582] |
|
|
0.0 | [4..587] | [20..633] |
|
|
0.0 | [15..587] | [32..609] |
|
|
0.0 | [15..586] | [32..608] |
|
Region A: Residues: [1-56] |
1 11 21 31 41 51
| | | | | |
1 MDILKRGNES DKFTKIETES TTIPNDSDRS GSLIRRMKDS FKQSNLHVIP EDLENS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [57-587] |
1 11 21 31 41 51
| | | | | |
1 EQTEQEKIQW KLASQPYQKV LSQRHLTMIA IGGTLGTGLF IGLGYSLASG PAALLIGFLL 60
61 VGTSMFCVVQ SAAELSCQFP VSGSYATHVS RFIDESVGFT VATNYALAWL ISFPSELIGC 120
121 ALTISYWNQT VNPAVWVAIF YVFIMVLNLF GVRGFAETEF ALSIIKVIAI FIFIIIGIVL 180
181 IAGGGPNSTG YIGAKYWHDP GAFAKPVFKN LCNTFVSAAF SFGGSELVLL TSTESKNISA 240
241 ISRAAKGTFW RIAIFYITTV VIIGCLVPYN DPRLLSGSNS EDVSASPFVI ALSNTGSMGA 300
301 KVSNFMNVVI LVAVVSVCNS CVYASSRLIQ ALGASGQLPS VCSYMDRKGR PLVGIGISGA 360
361 FGLLGFLVAS KKEDEVFTWL FALCSISSFF TWFCICMSQI RFRMALKAQG RSNDEIAYKS 420
421 ILGVYGGILG CVLNALLIAG EIYVSAAPVG SPSSAEAFFE YCLSIPIMIV VYFAHRFYRR 480
481 DWKHFYIKRS EIDLDTGCSV ENLELFKAQK EAEEQLIASK PFYYKIYRFW C
|
| Detection Method: | |
| Confidence: | 172.251812 |
| Match: | PF00324 |
| Description: | Amino acid permease |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
