| Protein: | SRP72 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 646 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRP72.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-85 | [1..601] | [458..1025] |
|
|
2.0E-81 | [3..549] | [52..591] |
|
|
6.0E-80 | [50..534] | [24..499] |
|
|
8.0E-80 | [50..534] | [24..499] |
|
|
2.0E-79 | [50..534] | [14..489] |
|
|
3.0E-76 | [50..534] | [53..528] |
|
|
8.0E-75 | [53..534] | [174..646] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MKESKKMAKD NLTNLLSQLN IQLSQDEHSQ VEQTCVKLLD SGCENPADVF RRCLVAVIQQ 60
61 DKYQKALHYL KKFKHIDDKY GRKFALEKLY IFYKLNMPDE FNTLYTAIIT DDLDTVLKKD 120
121 IESLRGILHV RAQYCYKNG
|
| Detection Method: |  |
| Confidence: | 19.0 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [140-249] |
1 11 21 31 41 51
| | | | | |
1 LYQEAFKIYQ HLASHNEKDQ DSQIELSCNE RVPLSVATEL MNRSPLVTPM DESSYDLLFN 60
61 ESFIMASVGK YDKAIELLEK ALQGATNEGY QNDINTIKLQ LSFVLQMVGK
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [250-378] |
1 11 21 31 41 51
| | | | | |
1 TAQSKEILKG LLQELKADSP FSLICQNNLN AFVDFSKYNT NFNLLLRELN VEKLNTFNLQ 60
61 TFTHEQWSNI QRNVLFLRLF NNVKIHSQES LLSRTFDKYS KLVDNVTLES YKTQAKKLYH 120
121 HTTKTILSG
|
| Detection Method: | |
| Confidence: | 10.09691 |
| Match: | 1kt1A_ |
| Description: | FKBP51, C-terminal domain; FKBP51, N-terminal domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [379-580] |
1 11 21 31 41 51
| | | | | |
1 TDGSTIGILL LTIQLLIIEK EWENAIRIGE LFLNESWKSS FEKFNDSQAI VCYILFELYK 60
61 IKGRNNSKSV LLKKLGSVRV QLSGKIQENI PFWKHVGFEL LSMGNAKESK ALLREISNFS 120
121 KGDADVLVDR VVSSDSLDIA QGIDLVRDID IDKLIQLGVK PLESSAKRSK NTAVSKVQKR 180
181 KVLELKKKRK IKRLEKFLQG RD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [581-646] |
1 11 21 31 41 51
| | | | | |
1 TSKLPDPERW LPLRDRSTYR PKKKQQGAKQ TQGGAMNKKS EQALDISKKG KPTVNKKPKN 60
61 KKKGRK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.256 | 0.162 | signal sequence binding | a.3.1 | Cytochrome c |
| View | Download | 0.230 | N/A | N/A | a.76.1 | Iron-dependent represor protein, dimerization domain |
