Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL199C.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-85 | [1..240] | [1..240] |
|
|
2.0E-50 | [24..196] | [2..175] |
|
|
1.0E-49 | [10..171] | [1602..1770] |
|
|
1.0E-48 | [21..203] | [20..200] |
|
|
2.0E-43 | [6..174] | [334..503] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MKGTGGVVVG TQNPVRDYNH STDEEYQRLR RLADEAYKKR DQLSHESQTA YQQGDKKLAH 60
61 ELSEKSKAQL KTAEDFNMQA AEYVFVENNA DS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.945 | 0.000 | cytoplasm | a.7.1 | Spectrin repeat |
| View | Download | 0.935 | 0.000 | cytoplasm | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.971 | 0.000 | cytoplasm | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.927 | 0.000 | cytoplasm | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.971 | 0.000 | cytoplasm | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.945 | 0.000 | cytoplasm | a.7.1 | Spectrin repeat |
| View | Download | 0.935 | 0.000 | cytoplasm | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.927 | 0.000 | cytoplasm | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.919 | 0.000 | cytoplasm | a.7.1 | Spectrin repeat |
| View | Download | 0.915 | 0.000 | cytoplasm | a.2.7 | tRNA-binding arm |
| View | Download | 0.896 | 0.000 | cytoplasm | a.7.1 | Spectrin repeat |
| View | Download | 0.878 | 0.000 | cytoplasm | a.47.2 | t-snare proteins |
| View | Download | 0.866 | 0.000 | cytoplasm | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.843 | 0.000 | cytoplasm | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.834 | 0.000 | cytoplasm | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.803 | 0.000 | cytoplasm | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.785 | 0.000 | cytoplasm | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.784 | 0.000 | cytoplasm | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.781 | 0.000 | cytoplasm | a.7.4 | Smac/diablo |
| View | Download | 0.777 | 0.000 | cytoplasm | a.25.1 | Ferritin-like |
| View | Download | 0.770 | 0.000 | cytoplasm | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.758 | 0.000 | cytoplasm | a.2.7 | tRNA-binding arm |
| View | Download | 0.756 | 0.000 | cytoplasm | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.747 | 0.000 | cytoplasm | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.734 | 0.000 | cytoplasm | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.720 | 0.000 | cytoplasm | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.701 | 0.000 | cytoplasm | a.7.7 | BAG domain |
| View | Download | 0.700 | 0.000 | cytoplasm | a.47.2 | t-snare proteins |
| View | Download | 0.696 | 0.000 | cytoplasm | a.24.1 | Apolipoprotein |
| View | Download | 0.692 | 0.000 | cytoplasm | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.681 | 0.000 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.676 | 0.000 | cytoplasm | a.29.2 | Bromodomain |
| View | Download | 0.657 | 0.000 | cytoplasm | a.2.5 | Prefoldin |
| View | Download | 0.652 | 0.000 | cytoplasm | a.25.1 | Ferritin-like |
| View | Download | 0.649 | 0.000 | cytoplasm | a.2.7 | tRNA-binding arm |
| View | Download | 0.622 | 0.000 | cytoplasm | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.621 | 0.000 | cytoplasm | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.617 | 0.000 | cytoplasm | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.616 | 0.000 | cytoplasm | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.615 | 0.000 | cytoplasm | a.25.1 | Ferritin-like |
| View | Download | 0.588 | 0.000 | cytoplasm | a.2.7 | tRNA-binding arm |
| View | Download | 0.587 | 0.000 | cytoplasm | a.2.5 | Prefoldin |
| View | Download | 0.566 | 0.000 | cytoplasm | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.535 | 0.000 | cytoplasm | a.25.1 | Ferritin-like |
| View | Download | 0.529 | 0.000 | cytoplasm | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.525 | 0.000 | cytoplasm | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.519 | 0.000 | cytoplasm | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.516 | 0.000 | cytoplasm | f.28.1 | Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.513 | 0.000 | cytoplasm | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.487 | 0.000 | cytoplasm | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.480 | 0.000 | cytoplasm | a.46.1 | Methionine synthase domain |
| View | Download | 0.478 | 0.000 | cytoplasm | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.476 | 0.000 | cytoplasm | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.470 | 0.000 | cytoplasm | a.25.1 | Ferritin-like |
| View | Download | 0.454 | 0.000 | cytoplasm | a.7.8 | GAT domain |
| View | Download | 0.453 | 0.000 | cytoplasm | a.63.1 | Apolipophorin-III |
| View | Download | 0.451 | 0.000 | cytoplasm | a.30.1 | ROP protein |
| View | Download | 0.449 | 0.000 | cytoplasm | a.59.1 | PAH2 domain |
| View | Download | 0.432 | 0.000 | cytoplasm | a.47.2 | t-snare proteins |
| View | Download | 0.431 | 0.000 | cytoplasm | a.2.3 | Chaperone J-domain |
| View | Download | 0.424 | 0.000 | cytoplasm | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.421 | 0.000 | cytoplasm | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.421 | 0.000 | cytoplasm | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.410 | 0.000 | cytoplasm | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.397 | 0.000 | cytoplasm | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.395 | 0.000 | cytoplasm | a.24.4 | Hemerythrin |
| View | Download | 0.381 | 0.000 | cytoplasm | a.29.2 | Bromodomain |
| View | Download | 0.377 | 0.000 | cytoplasm | a.26.1 | 4-helical cytokines |
| View | Download | 0.377 | 0.000 | cytoplasm | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.367 | 0.000 | cytoplasm | a.118.7 | 14-3-3 protein |
| View | Download | 0.360 | 0.000 | cytoplasm | a.24.11 | Bacterial GAP domain |
| View | Download | 0.342 | 0.000 | cytoplasm | a.118.14 | FliG |
| View | Download | 0.340 | 0.000 | cytoplasm | a.7.1 | Spectrin repeat |
| View | Download | 0.338 | 0.000 | cytoplasm | g.44.1 | RING/U-box |
| View | Download | 0.337 | 0.000 | cytoplasm | a.118.10 | Phosphoinositide-binding clathrin adaptor, N-terminal domain |
| View | Download | 0.337 | 0.000 | cytoplasm | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.335 | 0.000 | cytoplasm | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.332 | 0.000 | cytoplasm | a.26.1 | 4-helical cytokines |
| View | Download | 0.326 | 0.000 | cytoplasm | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.325 | 0.000 | cytoplasm | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.324 | 0.000 | cytoplasm | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.323 | 0.000 | cytoplasm | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.323 | 0.000 | cytoplasm | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.323 | 0.000 | cytoplasm | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.320 | 0.000 | cytoplasm | d.58.12 | eEF-1beta-like |
| View | Download | 0.319 | 0.000 | cytoplasm | f.28.1 | Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.319 | 0.000 | cytoplasm | a.22.1 | Histone-fold |
| View | Download | 0.304 | 0.000 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.303 | 0.000 | cytoplasm | a.29.2 | Bromodomain |
| View | Download | 0.298 | 0.000 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.297 | 0.000 | cytoplasm | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.296 | 0.000 | cytoplasm | d.232.1 | Mago nashi protein |
| View | Download | 0.294 | 0.000 | cytoplasm | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.289 | 0.000 | cytoplasm | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.287 | 0.000 | cytoplasm | a.22.1 | Histone-fold |
| View | Download | 0.284 | 0.000 | cytoplasm | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.282 | 0.000 | cytoplasm | a.2.3 | Chaperone J-domain |
| View | Download | 0.280 | 0.000 | cytoplasm | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.280 | 0.000 | cytoplasm | a.24.3 | Cytochromes |
| View | Download | 0.275 | 0.000 | cytoplasm | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.271 | 0.000 | cytoplasm | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.270 | 0.000 | cytoplasm | a.118.8 | TPR-like |
| View | Download | 0.269 | 0.000 | cytoplasm | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.268 | 0.000 | cytoplasm | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.260 | 0.000 | cytoplasm | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.258 | 0.000 | cytoplasm | a.19.1 | Fertilization protein |
| View | Download | 0.256 | 0.000 | cytoplasm | a.22.1 | Histone-fold |
| View | Download | 0.251 | 0.000 | cytoplasm | a.7.7 | BAG domain |
| View | Download | 0.247 | 0.000 | cytoplasm | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.244 | 0.000 | cytoplasm | f.5.1 | Integral outer membrane protein TolC, efflux pump component |
| View | Download | 0.242 | 0.000 | cytoplasm | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.241 | 0.000 | cytoplasm | a.64.1 | Saposin |
| View | Download | 0.239 | 0.000 | cytoplasm | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.239 | 0.000 | cytoplasm | a.4.1 | Homeodomain-like |
| View | Download | 0.237 | 0.000 | cytoplasm | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.237 | 0.000 | cytoplasm | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.235 | 0.000 | cytoplasm | a.38.1 | Helix-loop-helix DNA-binding domain |
| View | Download | 0.232 | 0.000 | cytoplasm | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.231 | 0.000 | cytoplasm | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.229 | 0.000 | cytoplasm | a.47.2 | t-snare proteins |
| View | Download | 0.224 | 0.000 | cytoplasm | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.224 | 0.000 | cytoplasm | b.88.1 | Mss4-like |
| View | Download | 0.224 | 0.000 | cytoplasm | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.212 | 0.000 | cytoplasm | a.63.1 | Apolipophorin-III |
| View | Download | 0.206 | 0.000 | cytoplasm | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.203 | 0.000 | cytoplasm | a.118.1 | ARM repeat |
|
Region A: Residues: [93-240] |
1 11 21 31 41 51
| | | | | |
1 SSNEIDLHGL YVKEALFILQ KRIKFAIDHN EPQLNVIVGK GLHSQNGIAK LKPSIEEFCA 60
61 KHGIRNHLEK GNSGVLVLEL QGVQMQMDGP AVNAPTNQYN AQPHPQYNNN GGQPQGQAQN 120
121 YNNSGNDNKD STLTSIFKIF CNCIQSLA
|
| Detection Method: | |
| Confidence: | 27.769551 |
| Match: | PF01713 |
| Description: | Smr domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 0.780949548591104 | bayes_pls_golite062009 |
| protein binding | 0.245678926103876 | bayes_pls_golite062009 |
