| Protein: | DBP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 617 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DBP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..617] | [1..617] |
|
|
0.0 | [2..617] | [10..656] |
|
|
0.0 | [3..573] | [11..604] |
|
|
0.0 | [3..573] | [11..604] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MADLPQKVSN LSINNKENGG GGGKSSYVPP HLRSRGKPSF ERSTPKQEDK VTGGDFFRRA 60
61 GRQTGNNGGF FGFSKERNGG TSANYNRGGS SNYKSSGNRW VNGKHIPGPK NAKLEAELFG 120
121 VHDDPDYHSS GIKFDNYDNI PVDASG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [147-381] |
1 11 21 31 41 51
| | | | | |
1 KDVPEPILDF SSPPLDELLM ENIKLASFTK PTPVQKYSIP IVTKGRDLMA CAQTGSGKTG 60
61 GFLFPLFTEL FRSGPSPVPE KAQSFYSRKG YPSALVLAPT RELATQIFEE ARKFTYRSWV 120
121 RPCVVYGGAP IGNQMREVDR GCDLLVATPG RLNDLLERGK VSLANIKYLV LDEADRMLDM 180
181 GFEPQIRHIV EECDMPSVEN RQTLMFSATF PVDIQHLARD FLDNYIFLSV GRVGS
|
| Detection Method: | |
| Confidence: | 651.228787 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [382-557] |
1 11 21 31 41 51
| | | | | |
1 TSENITQRIL YVDDMDKKSA LLDLLSAEHK GLTLIFVETK RMADQLTDFL IMQNFKATAI 60
61 HGDRTQAERE RALSAFKANV ADILVATAVA ARGLDIPNVT HVINYDLPSD IDDYVHRIGR 120
121 TGRAGNTGVA TSFFNSNNQN IVKGLMEILN EANQEVPTFL SDLSRQNSRG GRTRGG
|
| Detection Method: | |
| Confidence: | 651.228787 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [558-617] |
1 11 21 31 41 51
| | | | | |
1 GGFFNSRNNG SRDYRKHGGN GSFGSTRPRN TGTSNWGSIG GGFRNDNEKN GYGNSNASWW 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
