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Protein Overview: DBP1_YEAST

General Information:
Name(s) found: DBP1_YEAST [Swiss-Prot]
Description(s) found:
  • ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DBP1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 617 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLPQKVSN LSINNKENGG GGGKSSYVPP HLRSRGKPSF ERSTPKQEDK VTGGDFFRRA  60
   61 GRQTGNNGGF FGFSKERNGG TSANYNRGGS SNYKSSGNRW VNGKHIPGPK NAKLEAELFG 120
  121 VHDDPDYHSS GIKFDNYDNI PVDASGKDVP EPILDFSSPP LDELLMENIK LASFTKPTPV 180
  181 QKYSIPIVTK GRDLMACAQT GSGKTGGFLF PLFTELFRSG PSPVPEKAQS FYSRKGYPSA 240
  241 LVLAPTRELA TQIFEEARKF TYRSWVRPCV VYGGAPIGNQ MREVDRGCDL LVATPGRLND 300
  301 LLERGKVSLA NIKYLVLDEA DRMLDMGFEP QIRHIVEECD MPSVENRQTL MFSATFPVDI 360
  361 QHLARDFLDN YIFLSVGRVG STSENITQRI LYVDDMDKKS ALLDLLSAEH KGLTLIFVET 420
  421 KRMADQLTDF LIMQNFKATA IHGDRTQAER ERALSAFKAN VADILVATAV AARGLDIPNV 480
  481 THVINYDLPS DIDDYVHRIG RTGRAGNTGV ATSFFNSNNQ NIVKGLMEIL NEANQEVPTF 540
  541 LSDLSRQNSR GGRTRGGGGF FNSRNNGSRD YRKHGGNGSF GSTRPRNTGT SNWGSIGGGF 600
  601 RNDNEKNGYG NSNASWW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] MSA 7.633997 View MSA. No confident structure predictions are available.
    2 View Details [147..381] PSI-BLAST 651.228787 Putative DEAD box RNA helicase
    3 View Details [382..557] PSI-BLAST 651.228787 Putative DEAD box RNA helicase
    4 View Details [558..617] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle