| Protein: | ATG21 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 496 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG21.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..495] | [1217..1677] |
|
|
0.0 | [1..496] | [951..1454] |
|
|
0.0 | [1..496] | [834..1295] |
|
Region A: Residues: [1-366] |
1 11 21 31 41 51
| | | | | |
1 MKVLQFNQDA TCCVVAASSH QISIFNCDPF GKCFEIDTKN SKKKTSNNNG SASNSESRNN 60
61 EESILITNGS RDRTDAEEEE DNEDNALVTG NILKEGEFVI EMLFSTSLIA IADRGQGLNK 120
121 GKKLKIVNTK RKCTICEIVF PHEIVDVVMN RKRMCVLLES DQIFIYDISC MKPLETIDLW 180
181 EDHYKRSQAN SFSNASNTGT LEGDSANLNR VATNLLANAT QKSVNGSNPS VRTRRNSLRS 240
241 KIRPRMVLSN DDRSILCFTA YSSPKKNKPN SEALYDVVIY DTLNVTPVNY LNSVHKGNVA 300
301 CLAVSHDGKL LATASDKGTI IRVFHTGVDS DYMSSRSLFK EFRRGTRLCN LYQLAFDKSM 360
361 TMIGCV
|
| Detection Method: |  |
| Confidence: | 38.522879 |
| Match: | 1nexB_ |
| Description: | Cdc4 F-box and linker domains; Cdc4 propeller domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [367-423] |
1 11 21 31 41 51
| | | | | |
1 GDTDTIHLFK LDDASNSLPG DNSSNGHWNE EEYILASNSN PSMGTPKEIP LSKPRIA
|
| Detection Method: | |
| Confidence: | 16.30103 |
| Match: | 1k8kC_ |
| Description: | Arp2/3 complex 41 kDa subunit ARPC1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [424-496] |
1 11 21 31 41 51
| | | | | |
1 NYFSKKIKSS IPNQNLSRNF AYITVNESNR SCLGFPDEFP NQVYIASDDG TFSIYSIPSK 60
61 PGECVLTKNN KFT
|
| Detection Method: | |
| Confidence: | 63.0 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
